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Description : RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum (sp|q9sq56|rgga_tobac : 111.0)
Gene families : OG0000880 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000880_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00056p00215280 | evm_27.TU.AmTr_v1... | RGG repeats nuclear RNA binding protein A (Fragment)... | 0.02 | OrthoFinder output from all 47 species | |
| AT5G47210 | No alias | Hyaluronan / mRNA binding family | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g060796 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g060797 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g117739 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g07778 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g01665 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g12133 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g01753 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g30074 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g010039 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0208.g057973 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.08 | OrthoFinder output from all 47 species | |
| Cba_g17505 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.01G019400.1 | Ceric.01G019400 | regulatory protein *(RGG) of mRNA quality control &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.19G044900.1 | Ceric.19G044900 | regulatory protein *(RGG) of mRNA quality control &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.30G035000.1 | Ceric.30G035000 | regulatory protein *(RGG) of mRNA quality control &... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000404.31 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g06916 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g25280 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01002125001 | No alias | RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana | 0.1 | OrthoFinder output from all 47 species | |
| GSVIVT01018290001 | No alias | RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana | 0.09 | OrthoFinder output from all 47 species | |
| Len_g12236 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g13836 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g02947 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.02 | OrthoFinder output from all 47 species | |
| Mp4g04410.1 | No alias | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g09170 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g20547 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g04627 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g06151 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g26229 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g09394 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g20153 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g26127 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.02 | OrthoFinder output from all 47 species | |
| Smo448524 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g090190.3.1 | Solyc01g090190 | RGG repeats nuclear RNA binding protein A OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g31252 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.09 | OrthoFinder output from all 47 species | |
| Spa_g50119 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g51990 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g05938 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g13963 | No alias | regulatory protein *(RGG) of mRNA quality control &... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e019955_P001 | Zm00001e019955 | RGG repeats nuclear RNA binding protein A (Fragment)... | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e019958_P002 | Zm00001e019958 | RGG repeats nuclear RNA binding protein A (Fragment)... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e026661_P002 | Zm00001e026661 | RGG repeats nuclear RNA binding protein A (Fragment)... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003922 | GMP synthase (glutamine-hydrolyzing) activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006177 | GMP biosynthetic process | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
| BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
| BP | GO:0009123 | nucleoside monophosphate metabolic process | IEP | HCCA |
| BP | GO:0009124 | nucleoside monophosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009126 | purine nucleoside monophosphate metabolic process | IEP | HCCA |
| BP | GO:0009127 | purine nucleoside monophosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009156 | ribonucleoside monophosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009161 | ribonucleoside monophosphate metabolic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009167 | purine ribonucleoside monophosphate metabolic process | IEP | HCCA |
| BP | GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0046037 | GMP metabolic process | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |