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  5. MA_942991g0010

MA_942991g0010 (ATRAB8D, ATRABE1B, RABE1b)


Aliases : ATRAB8D, ATRABE1B, RABE1b

Description : EF-Tu translation elongation factor


Gene families : OG0001305 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001305_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_942991g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00227880 ATRAB8D,... Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
AT4G20360 ATRAB8D, ATRABE1B, RABE1b RAB GTPase homolog E1B 0.11 OrthoFinder output from all 47 species
Adi_g075285 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.07 OrthoFinder output from all 47 species
Aev_g21041 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.08 OrthoFinder output from all 47 species
Aev_g27656 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.05 OrthoFinder output from all 47 species
Ala_g04793 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Als_g08146 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.02 OrthoFinder output from all 47 species
Als_g09356 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.06 OrthoFinder output from all 47 species
Als_g23756 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.05 OrthoFinder output from all 47 species
Als_g62452 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Aob_g15070 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.06 OrthoFinder output from all 47 species
Aop_g10494 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.1 OrthoFinder output from all 47 species
Aspi01Gene10728.t1 ATRAB8D,... translation elongation factor *(EF-Tu) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene22120.t1 ATRAB8D,... translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0292.g063375 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Cba_g06908 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.05 OrthoFinder output from all 47 species
Cba_g22191 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Cba_g70878 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.08 OrthoFinder output from all 47 species
Ceric.10G078000.1 ATRAB8D,... translation elongation factor *(EF-Tu) & original... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021127.40 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Dac_g02773 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.07 OrthoFinder output from all 47 species
Dac_g08520 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.06 OrthoFinder output from all 47 species
Dcu_g08765 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Dde_g18792 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.06 OrthoFinder output from all 47 species
Ehy_g09796 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01007638001 ATRAB8D, ATRABE1B, RABE1b Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
Gb_29040 ATRAB8D, ATRABE1B, RABE1b EF-Tu translation elongation factor 0.08 OrthoFinder output from all 47 species
LOC_Os02g38210.1 ATRAB8D,... EF-Tu translation elongation factor 0.05 OrthoFinder output from all 47 species
Len_g22333 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.06 OrthoFinder output from all 47 species
Len_g22334 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Len_g31034 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g06070 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.06 OrthoFinder output from all 47 species
Mp1g03870.1 ATRAB8D, ATRABE1B, RABE1b EF-Tu translation elongation factor 0.06 OrthoFinder output from all 47 species
Msp_g11454 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g13791 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g14071 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.07 OrthoFinder output from all 47 species
Pir_g05476 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.05 OrthoFinder output from all 47 species
Pnu_g24392 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.06 OrthoFinder output from all 47 species
Pnu_g24394 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.05 OrthoFinder output from all 47 species
Pp3c1_38670V3.1 ATRAB8D,... RAB GTPase homolog E1B 0.02 OrthoFinder output from all 47 species
Sam_g07638 No alias translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Smo233481 ATRAB8D, ATRABE1B, RABE1b Protein biosynthesis.organelle translation... 0.08 OrthoFinder output from all 47 species
Solyc03g112150.1.1 ATRAB8D,... EF-Tu translation elongation factor 0.06 OrthoFinder output from all 47 species
Solyc06g071790.3.1 ATRAB8D,... EF-Tu translation elongation factor 0.07 OrthoFinder output from all 47 species
Spa_g10864 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.07 OrthoFinder output from all 47 species
Spa_g10866 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.02 OrthoFinder output from all 47 species
Spa_g18775 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.02 OrthoFinder output from all 47 species
Spa_g50677 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Tin_g05984 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.07 OrthoFinder output from all 47 species
Zm00001e015008_P001 ATRAB8D,... EF-Tu translation elongation factor 0.08 OrthoFinder output from all 47 species
Zm00001e022880_P001 ATRAB8D,... EF-Tu translation elongation factor 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004160 Transl_elong_EFTu/EF1A_C 438 537
IPR000795 T_Tr_GTP-bd_dom 91 209
IPR004161 EFTu-like_2 365 433
No external refs found!