1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_80085g0010

MA_80085g0010 (HCHIB, B-CHI,...)


Aliases : HCHIB, B-CHI, ATHCHIB, PR-3, PR3, CHI-B

Description : Basic endochitinase C OS=Secale cereale (sp|q9frv0|chic_secce : 322.0)


Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_80085g0010
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00243300 HCHIB, B-CHI,... Endochitinase A2 OS=Pisum sativum 0.02 OrthoFinder output from all 47 species
AMTR_s00001p00243680 HCHIB, B-CHI,... Chitinase 3 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
AMTR_s00001p00243780 HCHIB, B-CHI,... Endochitinase A2 OS=Pisum sativum 0.03 OrthoFinder output from all 47 species
AMTR_s00066p00199730 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G02360 No alias Chitinase family protein 0.05 OrthoFinder output from all 47 species
AT2G43580 No alias Chitinase family protein 0.03 OrthoFinder output from all 47 species
AT2G43600 No alias Chitinase family protein 0.03 OrthoFinder output from all 47 species
AT2G43610 No alias Chitinase family protein 0.03 OrthoFinder output from all 47 species
AT2G43620 No alias Chitinase family protein 0.06 OrthoFinder output from all 47 species
AT4G01700 No alias Chitinase family protein 0.04 OrthoFinder output from all 47 species
Aev_g02874 HCHIB, B-CHI,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25708 ATEP3, EP3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g35616 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48650 ATEP3, EP3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g35678 ATEP3, EP3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32113.t1 ATEP3, EP3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000740 No alias not classified & original description: CDS=1-501 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000741 ATEP3, EP3,... not classified & original description: CDS=226-924 0.05 OrthoFinder output from all 47 species
Azfi_s0001.g000746 ATEP3, EP3,... not classified & original description: CDS=491-1327 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000750 ATEP3, EP3,... not classified & original description: CDS=1-942 0.03 OrthoFinder output from all 47 species
Dcu_g25280 HCHIB, B-CHI,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_03375 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Gb_03376 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Gb_34558 ATEP3, EP3,... Chitinase 6 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os01g18400.1 LOC_Os01g18400 Chitinase 10 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
LOC_Os02g39330.1 ATEP3, EP3,... Chitinase 6 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os04g09390.1 LOC_Os04g09390 Lectin OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os05g33150.1 HCHIB, B-CHI,... Chitinase 7 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os10g39680.1 HCHIB, B-CHI,... Chitinase 8 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
MA_10425967g0010 HCHIB, B-CHI,... Basic endochitinase OS=Vitis vinifera... 0.04 OrthoFinder output from all 47 species
MA_117029g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_1327504g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_159244g0020 No alias Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 251.0) 0.06 OrthoFinder output from all 47 species
MA_295712g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
MA_448160g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
MA_530083g0010 HCHIB, B-CHI,... no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_6093228g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_741127g0010 No alias Endochitinase At2g43610 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_8960362g0010 HCHIB, B-CHI,... Endochitinase 1 OS=Theobroma cacao (sp|q41596|chi1_thecc : 81.6) 0.05 OrthoFinder output from all 47 species
MA_9682123g0010 ATEP3, EP3,... Chitinase 4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Mp5g21830.1 HCHIB, B-CHI,... Endochitinase CH25 OS=Brassica napus... 0.03 OrthoFinder output from all 47 species
Ore_g32598 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g01615 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c6_130V3.1 HCHIB, B-CHI,... basic chitinase 0.01 OrthoFinder output from all 47 species
Ppi_g06049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g082960.3.1 HCHIB, B-CHI,... Basic endochitinase (Fragment) OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Solyc07g009510.1.1 HEL, PR4, PR-4,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g074440.2.1 HCHIB, B-CHI,... Endochitinase OS=Solanum tuberosum (sp|p05315|chit_soltu : 491.0) 0.03 OrthoFinder output from all 47 species
Zm00001e002252_P001 HCHIB, B-CHI,... Chitinase 8 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e030152_P001 HCHIB, B-CHI,... Basic endochitinase A OS=Secale cereale... 0.02 OrthoFinder output from all 47 species
Zm00001e041138_P001 ATEP3, EP3,... Endochitinase B (Fragment) OS=Zea mays... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA Interproscan
BP GO:0006032 chitin catabolic process IEA Interproscan
BP GO:0016998 cell wall macromolecule catabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 36 254
No external refs found!