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  5. MA_7997902g0010

MA_7997902g0010 (CPS, ATCPS1, ABC33, CPS1, GA1)


Aliases : CPS, ATCPS1, ABC33, CPS1, GA1

Description : Carene synthase 3, chloroplastic OS=Picea sitchensis (sp|f1cki9|3car3_picsi : 390.0) & Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase(50.4.2 : 35.3)


Gene families : OG0008445 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008445_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_7997902g0010
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
MA_10224015g0010 CPS, ATCPS1,... Pinene synthase, chloroplastic OS=Picea sitchensis... 0.03 OrthoFinder output from all 47 species
MA_10406138g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10428099g0010 ATTPS14, TPS14 (+)-alpha-pinene synthase, chloroplastic OS=Pinus taeda... 0.03 OrthoFinder output from all 47 species
MA_10429330g0010 ATTPS14, TPS14 Pinene synthase, chloroplastic OS=Picea sitchensis... 0.01 OrthoFinder output from all 47 species
MA_187296g0010 No alias Myrcene synthase, chloroplastic OS=Abies grandis... 0.01 OrthoFinder output from all 47 species
MA_459007g0010 No alias Limonene synthase, chloroplastic OS=Abies grandis... 0.04 OrthoFinder output from all 47 species
MA_491718g0010 CPS, ATCPS1,... Gamma-humulene synthase OS=Abies grandis... 0.05 OrthoFinder output from all 47 species
MA_5540381g0010 CPS, ATCPS1,... Delta-selinene synthase OS=Abies grandis... 0.03 OrthoFinder output from all 47 species
MA_737780g0010 CPS, ATCPS1,... Gamma-humulene synthase OS=Abies grandis... 0.04 OrthoFinder output from all 47 species
MA_8077891g0010 KS, KS1, ATKS1, ATKS, GA2 Gamma-humulene synthase OS=Abies grandis... 0.06 OrthoFinder output from all 47 species
MA_9290847g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0070567 cytidylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 74 191
No external refs found!