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Description : transcription factor (Trihelix)
Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00271480 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.Trihelix... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00041p00147950 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.Trihelix... | 0.05 | OrthoFinder output from all 47 species | |
| AT1G76880 | No alias | Duplicated homeodomain-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g050830 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g08051 | No alias | Trihelix-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g27632 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g36226 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g09478 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18257 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g25951 | No alias | Trihelix-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g50192 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g57836 | No alias | Trihelix-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g59070 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g09047 | No alias | Trihelix-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene01829.t1 | Aspi01Gene01829 | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene48921.t1 | AT-GTL1, GTL1,... | Trihelix-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene54632.t1 | Aspi01Gene54632 | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene55558.t1 | Aspi01Gene55558 | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene69749.t1 | AT-GTL1, GTL1,... | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g25631 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g26683 | No alias | Trihelix-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g72625 | No alias | Trihelix-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.36G000200.1 | Ceric.36G000200 | Trihelix-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g08329 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g04858 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g22999 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g39560 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g24778 | No alias | Trihelix-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g27401 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Gb_31300 | No alias | transcription factor (Trihelix) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_38519 | No alias | transcription factor (Trihelix) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g45750.1 | LOC_Os04g45750 | transcription factor (Trihelix) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g37240.4 | LOC_Os10g37240 | Trihelix transcription factor GT-2 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g07748 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g19098 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g19264 | No alias | Trihelix-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g35326 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06235 | AT-GTL1, GTL1, AT-GTL2 | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10433499g0020 | AT-GT2, GT2 | transcription factor (Trihelix) | 0.03 | OrthoFinder output from all 47 species | |
| MA_47951g0010 | No alias | transcription factor (Trihelix) | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g06995 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g10228 | AT-GT2, GT2 | zf-HD-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g10229 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g35869 | No alias | Trihelix-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g11220 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g25172 | No alias | Trihelix-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g08779 | No alias | Trihelix-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g42672 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g27535 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g59710 | No alias | Trihelix-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g65125 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g16876 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g27740 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0084.g018240 | AT-GT2, GT2 | Trihelix-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0147.g023173 | No alias | Trihelix-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g51431 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g31947 | No alias | Trihelix-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e000092_P003 | AT-GTL1, GTL1,... | transcription factor (Trihelix) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e004364_P002 | Zm00001e004364 | transcription factor (Trihelix) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e007383_P001 | Zm00001e007383 | transcription factor (Trihelix) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e012540_P001 | Zm00001e012540 | transcription factor (Trihelix) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015297 | antiporter activity | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |