MA_6790522g0010 (WRKY42, AtWRKY42)

Aliases : WRKY42, AtWRKY42

Description : transcription factor (WRKY)

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_6790522g0010

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00078p00145410	ATWRKY50,...	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
AMTR_s00078p00171140	ATWRKY13,...	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
AMTR_s00089p00116260	AtWRKY20,...	No description available	0.04	OrthoFinder output from all 47 species
AMTR_s00110p00091490	ATWRKY57,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AT4G26440	MSP3, ATWRKY34, WRKY34	WRKY DNA-binding protein 34	0.02	OrthoFinder output from all 47 species
Aev_g46671	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene13547.t1	WRKY4, Aspi01Gene13547	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g09920	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01020864001	WRKY28, ATWRKY28	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
LOC_Os05g09020.1	ATWRKY50,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os09g25070.1	ATWRKY40,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os09g30400.3	WRKY2, ATWRKY2,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_17107g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Ore_g19872	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc04g051540.3.1	ATWRKY13,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc08g081630.2.1	WRKY56,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc12g014610.2.1	AtWRKY20,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Tin_g03844	No alias	WRKY-type transcription factor & original description: none	0.07	OrthoFinder output from all 47 species
Zm00001e007834_P002	WRKY2, ATWRKY2,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e016669_P001	ATWRKY13,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	3	31

External Links

No external refs found!

MA_6790522g0010 (WRKY42, AtWRKY42)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation