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  5. MA_675g0010

MA_675g0010


Description : AP-1 complex subunit gamma-2 OS=Arabidopsis thaliana (sp|q9zui6|ap1g2_arath : 132.0)


Gene families : OG0002603 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002603_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_675g0010

Target Alias Description ECC score Gene Family Method Actions
AT1G23900 GAMMA-ADAPTIN 1,... gamma-adaptin 1 0.07 OrthoFinder output from all 47 species
AT1G60070 No alias Adaptor protein complex AP-1, gamma subunit 0.04 OrthoFinder output from all 47 species
Aev_g07309 GAMMA-ADAPTIN 1,... large subunit gamma of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Ala_g14098 No alias large subunit gamma of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Als_g14323 No alias large subunit gamma of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Aob_g02329 No alias large subunit gamma of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009317 No alias large subunit gamma of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Ceric.1Z105200.1 Ceric.1Z105200 large subunit gamma of AP-1 trans-Golgi network cargo... 0.05 OrthoFinder output from all 47 species
Ceric.37G015500.1 GAMMA-ADAPTIN 1,... not classified & original description: pacid=50616075... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000217.33 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
Cre16.g676650 GAMMA-ADAPTIN 1,... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.01 OrthoFinder output from all 47 species
Dcu_g01942 No alias large subunit gamma of AP-1 trans-Golgi network cargo... 0.08 OrthoFinder output from all 47 species
GSVIVT01020209001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.08 OrthoFinder output from all 47 species
Gb_02741 No alias large subunit gamma of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
LOC_Os02g56110.1 LOC_Os02g56110 large subunit gamma of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
LOC_Os06g07090.1 GAMMA-ADAPTIN 1,... large subunit gamma of AP-1 trans-Golgi network cargo... 0.06 OrthoFinder output from all 47 species
Len_g40020 No alias large subunit gamma of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Lfl_g22120 No alias large subunit gamma of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
MA_32067g0010 GAMMA-ADAPTIN 1,... AP-1 complex subunit gamma-1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Mp2g02140.1 GAMMA-ADAPTIN 1,... large subunit gamma of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Msp_g09172 No alias large subunit gamma of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Nbi_g04417 GAMMA-ADAPTIN 1,... large subunit gamma of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Ore_g15695 GAMMA-ADAPTIN 1,... large subunit gamma of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Pp3c8_5790V3.1 Pp3c8_5790 Adaptor protein complex AP-1, gamma subunit 0.03 OrthoFinder output from all 47 species
Ppi_g14572 No alias large subunit gamma of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Smo168054 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.05 OrthoFinder output from all 47 species
Solyc04g025870.4.1 Solyc04g025870 large subunit gamma of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Solyc05g005780.3.1 Solyc05g005780 large subunit gamma of AP-1 trans-Golgi network cargo... 0.05 OrthoFinder output from all 47 species
Spa_g55808 No alias large subunit gamma of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Tin_g02865 GAMMA-ADAPTIN 1,... large subunit gamma of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Zm00001e023661_P002 GAMMA-ADAPTIN 1,... large subunit gamma of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Zm00001e030101_P002 Zm00001e030101 large subunit gamma of AP-1 trans-Golgi network cargo... 0.05 OrthoFinder output from all 47 species
Zm00001e036396_P001 Zm00001e036396 large subunit gamma of AP-1 trans-Golgi network cargo... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!