MA_6399g0010


Description : F-box protein At1g67340 OS=Arabidopsis thaliana (sp|q9fyf9|fb76_arath : 246.0)


Gene families : OG0000510 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000510_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_6399g0010

Target Alias Description ECC score Gene Family Method Actions
Adi_g002428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g011762 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g018998 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022274 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g054757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02487 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g38101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02025 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13533.t1 Aspi01Gene13533 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene15724.t1 Aspi01Gene15724 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30003.t1 Aspi01Gene30003 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67042.t1 Aspi01Gene67042 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.17G014500.1 Ceric.17G014500 not classified & original description: pacid=50617361... 0.03 OrthoFinder output from all 47 species
Ceric.25G024100.1 Ceric.25G024100 not classified & original description: pacid=50593743... 0.03 OrthoFinder output from all 47 species
Ceric.28G046200.1 Ceric.28G046200 not classified & original description: pacid=50570096... 0.04 OrthoFinder output from all 47 species
Dcu_g04797 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g02435 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_13419 No alias F-box protein At1g67340 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g31610.1 LOC_Os04g31610 F-box protein At1g67340 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g08620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_219531g0010 No alias F-box protein At1g67340 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g03690 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g06780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013455 No alias not classified & original description: CDS=833-2278 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0128.g021897 No alias not classified & original description: CDS=923-2077 0.03 OrthoFinder output from all 47 species
Spa_g51464 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006597 Sel1-like 176 204
IPR006597 Sel1-like 136 173
IPR006597 Sel1-like 103 118
No external refs found!