Description : transcription factor (mTERF)
Gene families : OG0000165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000165_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: MA_593288g0010 | |
Cluster | HCCA: Cluster_234 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G61970 | No alias | Mitochondrial transcription termination factor family protein | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene51757.t1 | Aspi01Gene51757 | mTERF-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Aspi01Gene64001.t1 | Aspi01Gene64001 | mTERF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g25533 | No alias | mTERF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os06g12110.1 | LOC_Os06g12110 | transcription factor (mTERF) | 0.02 | OrthoFinder output from all 47 species | |
MA_10429074g0010 | No alias | transcription factor (mTERF) | 0.08 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003690 | double-stranded DNA binding | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006400 | tRNA modification | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
MF | GO:0008192 | RNA guanylyltransferase activity | IEP | HCCA |
MF | GO:0008193 | tRNA guanylyltransferase activity | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0070568 | guanylyltransferase activity | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003690 | MTERF | 97 | 313 |
No external refs found! |