Coexpression cluster: Cluster_234 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009892 negative regulation of metabolic process 4.65% (2/43) 7.07 0.000102 0.003163
GO:0010605 negative regulation of macromolecule metabolic process 4.65% (2/43) 7.07 0.000102 0.003163
GO:0031047 RNA-mediated gene silencing 4.65% (2/43) 7.79 3.7e-05 0.004568
GO:0010629 negative regulation of gene expression 4.65% (2/43) 7.28 7.7e-05 0.004757
GO:0010498 proteasomal protein catabolic process 2.33% (1/43) 9.6 0.00129 0.01
GO:0000347 THO complex 2.33% (1/43) 9.6 0.00129 0.01
GO:0000445 THO complex part of transcription export complex 2.33% (1/43) 9.6 0.00129 0.01
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process 2.33% (1/43) 9.6 0.00129 0.01
GO:0031145 anaphase-promoting complex-dependent catabolic process 2.33% (1/43) 10.6 0.000645 0.010003
GO:0030259 lipid glycosylation 2.33% (1/43) 10.6 0.000645 0.010003
GO:0048519 negative regulation of biological process 4.65% (2/43) 6.07 0.000413 0.010255
GO:0140535 intracellular protein-containing complex 4.65% (2/43) 5.43 0.00101 0.01044
GO:0019941 modification-dependent protein catabolic process 4.65% (2/43) 5.47 0.000955 0.01077
GO:0006511 ubiquitin-dependent protein catabolic process 4.65% (2/43) 5.47 0.000955 0.01077
GO:0043632 modification-dependent macromolecule catabolic process 4.65% (2/43) 5.47 0.000955 0.01077
GO:0005680 anaphase-promoting complex 2.33% (1/43) 9.01 0.001935 0.011425
GO:0000152 nuclear ubiquitin ligase complex 2.33% (1/43) 9.01 0.001935 0.011425
GO:0031461 cullin-RING ubiquitin ligase complex 2.33% (1/43) 9.01 0.001935 0.011425
GO:0030071 regulation of mitotic metaphase/anaphase transition 2.33% (1/43) 8.28 0.003223 0.012488
GO:0007346 regulation of mitotic cell cycle 2.33% (1/43) 8.28 0.003223 0.012488
GO:1902099 regulation of metaphase/anaphase transition of cell cycle 2.33% (1/43) 8.28 0.003223 0.012488
GO:0033045 regulation of sister chromatid segregation 2.33% (1/43) 8.28 0.003223 0.012488
GO:1901990 regulation of mitotic cell cycle phase transition 2.33% (1/43) 8.28 0.003223 0.012488
GO:0051983 regulation of chromosome segregation 2.33% (1/43) 8.28 0.003223 0.012488
GO:0033044 regulation of chromosome organization 2.33% (1/43) 8.28 0.003223 0.012488
GO:0070085 glycosylation 4.65% (2/43) 5.76 0.000635 0.013118
GO:0008417 fucosyltransferase activity 2.33% (1/43) 8.6 0.002579 0.013324
GO:0030258 lipid modification 2.33% (1/43) 8.6 0.002579 0.013324
GO:0030163 protein catabolic process 2.33% (1/43) 8.6 0.002579 0.013324
GO:0140513 nuclear protein-containing complex 4.65% (2/43) 4.95 0.001934 0.013326
GO:0051603 proteolysis involved in protein catabolic process 4.65% (2/43) 4.98 0.001859 0.013559
GO:0044265 cellular macromolecule catabolic process 4.65% (2/43) 4.59 0.003188 0.015814
GO:0009057 macromolecule catabolic process 4.65% (2/43) 4.31 0.004618 0.01636
GO:0000151 ubiquitin ligase complex 2.33% (1/43) 7.79 0.004509 0.016444
GO:0019773 proteasome core complex, alpha-subunit complex 2.33% (1/43) 7.79 0.004509 0.016444
GO:0044248 cellular catabolic process 4.65% (2/43) 4.18 0.005518 0.019006
GO:1902494 catalytic complex 4.65% (2/43) 4.14 0.005834 0.019553
GO:0003676 nucleic acid binding 11.63% (5/43) 2.03 0.007315 0.023869
GO:0032991 protein-containing complex 6.98% (3/43) 2.85 0.00843 0.026133
GO:0033043 regulation of organelle organization 2.33% (1/43) 6.79 0.008998 0.026565
GO:0010564 regulation of cell cycle process 2.33% (1/43) 6.79 0.008998 0.026565
GO:1901987 regulation of cell cycle phase transition 2.33% (1/43) 6.9 0.008358 0.026573
GO:0050789 regulation of biological process 9.3% (4/43) 2.18 0.011624 0.032031
GO:0016758 hexosyltransferase activity 4.65% (2/43) 3.64 0.011268 0.032495
GO:0065007 biological regulation 9.3% (4/43) 2.16 0.012058 0.032505
GO:0051128 regulation of cellular component organization 2.33% (1/43) 6.43 0.011554 0.032561
GO:1901575 organic substance catabolic process 4.65% (2/43) 3.56 0.012508 0.033
GO:0009056 catabolic process 4.65% (2/43) 3.52 0.013335 0.034448
GO:0010468 regulation of gene expression 6.98% (3/43) 2.48 0.016688 0.041385
GO:0051726 regulation of cell cycle 2.33% (1/43) 5.9 0.016647 0.042127
GO:0019222 regulation of metabolic process 6.98% (3/43) 2.43 0.018088 0.043133
GO:0060255 regulation of macromolecule metabolic process 6.98% (3/43) 2.43 0.018033 0.043845
GO:0070003 threonine-type peptidase activity 2.33% (1/43) 5.51 0.021715 0.048957
GO:0004298 threonine-type endopeptidase activity 2.33% (1/43) 5.51 0.021715 0.048957
GO:0005839 proteasome core complex 2.33% (1/43) 5.51 0.021715 0.048957
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_36 0.016 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_317 0.017 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_76 0.015 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_21 0.02 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_343 0.018 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_179 0.019 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_37 0.023 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_42 0.016 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_65 0.018 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_120 0.019 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_27 0.025 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_210 0.025 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_68 0.023 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_85 0.018 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_61 0.019 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_161 0.017 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_51 0.019 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_37 0.022 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_283 0.021 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_33 0.032 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_62 0.025 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_130 0.016 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_150 0.019 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_345 0.021 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_69 0.02 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_27 0.017 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_209 0.019 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_275 0.02 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_360 0.022 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_41 0.015 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_226 0.017 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_47 0.016 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_51 0.017 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_86 0.017 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_109 0.025 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_137 0.016 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_24 0.018 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_68 0.016 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_121 0.018 OrthoFinder output from all 47 species Compare
Sequences (43) (download table)

InterPro Domains

GO Terms

Family Terms