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Aliases : LDL3
Description : no hits & (original description: none)
Gene families : OG0002839 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002839_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_580945g0010 | |
| Cluster | HCCA: Cluster_128 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g022517 | PDS3, PDS, PDE226 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g07518 | PDS3, PDS, PDE226 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g03808 | PDS3, PDS, PDE226 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene35673.t1 | PDS3, PDS,... | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0022.g015979 | No alias | not classified & original description: CDS=212-1885 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g26743 | PDS3, PDS, PDE226 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G017400.1 | PDS3, PDS,... | not classified & original description: pacid=50621794... | 0.09 | OrthoFinder output from all 47 species | |
| Ceric.25G032300.1 | Ceric.25G032300 | not classified & original description: pacid=50594452... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000655.47 | TZ, THI4, THI1 | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001302.9 | PDE181, ZDS, SPC1 | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020734.51 | No alias | 15-cis-phytoene desaturase, chloroplastic/chromoplastic... | 0.03 | OrthoFinder output from all 47 species | |
| Cre13.g587500 | No alias | Phytoene dehydrogenase, chloroplastic/chromoplastic... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g13672 | PDS3, PDS, PDE226 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g09245 | PDS3, PDS, PDE226 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g01530 | PDS3, PDS, PDE226 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g47290.2 | LOC_Os04g47290 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g06016 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g34904 | PDS3, PDS, PDE226 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g18160.1 | PDS3, PDS, PDE226 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g10094 | PDS3, PDS, PDE226 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g03292 | PDS3, PDS, PDE226 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g56449 | PDS3, PDS, PDE226 | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Ppi_g05186 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Smo74261 | PDS3, PDS, PDE226 | 15-cis-phytoene desaturase, chloroplastic/chromoplastic... | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g29749 | PDS3, PDS, PDE226 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g13831 | PDS3, PDS, PDE226 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |