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Description : Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana (sp|q9ls25|pp420_arath : 656.0)
Gene families : OG0004930 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004930_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00149p00067630 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g46580,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00149p00067730 | evm_27.TU.AmTr_v1... | No description available | 0.05 | OrthoFinder output from all 47 species | |
| AT4G16390 | SVR7 | pentatricopeptide (PPR) repeat-containing protein | 0.1 | OrthoFinder output from all 47 species | |
| AT5G46580 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.1 | OrthoFinder output from all 47 species | |
| Adi_g113698 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g08632 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g02200 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Als_g01055 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g07311 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g08499 | EMB2750 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.15G014300.1 | Ceric.15G014300 | not classified & original description: pacid=50639905... | 0.07 | OrthoFinder output from all 47 species | |
| Dac_g15325 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g14136 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g07226 | SVR7 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01003493001 | SVR7 | Pentatricopeptide repeat-containing protein At4g16390,... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01003496001 | SVR7 | Pentatricopeptide repeat-containing protein At4g16390,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_19282 | No alias | Pentatricopeptide repeat-containing protein At5g46580,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g11670.1 | SVR7, LOC_Os03g11670 | Pentatricopeptide repeat-containing protein ATP4... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g02383 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05655 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g08510.1 | No alias | Pentatricopeptide repeat-containing protein At5g46580,... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g09352 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g01171 | SVR7 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Ore_g12890 | SVR7 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g15542 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g11215 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo10825 | No alias | Pentatricopeptide repeat-containing protein At5g46580,... | 0.03 | OrthoFinder output from all 47 species | |
| Smo442013 | No alias | Pentatricopeptide repeat-containing protein At5g46580,... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc11g012670.1.1 | SVR7, Solyc11g012670 | Pentatricopeptide repeat-containing protein At4g16390,... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g04939 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e000850_P001 | SVR7, Zm00001e000850 | Pentatricopeptide repeat-containing protein ATP4,... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e006409_P001 | Zm00001e006409 | Pentatricopeptide repeat-containing protein At5g46580,... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | HCCA |
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0004512 | inositol-3-phosphate synthase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006020 | inositol metabolic process | IEP | HCCA |
| BP | GO:0006021 | inositol biosynthetic process | IEP | HCCA |
| BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016872 | intramolecular lyase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019751 | polyol metabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0046165 | alcohol biosynthetic process | IEP | HCCA |
| BP | GO:0046173 | polyol biosynthetic process | IEP | HCCA |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | HCCA |
| No external refs found! |