MA_2299g0010 (LRP1)


Aliases : LRP1

Description : transcription factor (SRS)


Gene families : OG0001235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001235_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_2299g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00063p00161200 LRP1,... RNA biosynthesis.transcriptional activation.SRS... 0.03 OrthoFinder output from all 47 species
AT1G19790 SRS7 SHI-related sequence 7 0.03 OrthoFinder output from all 47 species
AT2G18120 SRS4 SHI-related sequence 4 0.02 OrthoFinder output from all 47 species
AT3G51060 SRS1, STY1 Lateral root primordium (LRP) protein-related 0.03 OrthoFinder output from all 47 species
AT4G36260 SRS2, STY2 Lateral root primordium (LRP) protein-related 0.02 OrthoFinder output from all 47 species
AT5G12330 LRP1 Lateral root primordium (LRP) protein-related 0.05 OrthoFinder output from all 47 species
Adi_g045239 SRS7 SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058362 SHI SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g061023 SHI SRS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g077130 SRS1, STY1 SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g079599 SRS1, STY1 SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g079607 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g085909 SRS1, STY1 SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g106034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26536 SHI SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g23682 SRS1, STY1 SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27015 SRS1, STY1 SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07658 SHI SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65745.t1 SHI, Aspi01Gene65745 SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0861.g090073 SHI SRS-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.02G095600.1 SHI, Ceric.02G095600 SRS-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.14G028100.1 SRS1, STY1,... SRS-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.25G035200.1 SRS1, STY1,... SRS-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.32G058400.1 SRS1, STY1,... SRS-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g13440 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13643 LRP1 SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16665 SRS1, STY1 SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g40676 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30563 SHI SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g47477 SHI SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13274 SHI SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21838 SRS1, STY1 SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009812001 SRS5 RNA biosynthesis.transcriptional activation.SRS... 0.03 OrthoFinder output from all 47 species
GSVIVT01024206001 SHI RNA biosynthesis.transcriptional activation.SRS... 0.04 OrthoFinder output from all 47 species
LOC_Os01g72490.1 LRP1, LOC_Os01g72490 transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
LOC_Os05g32070.1 LRP1, LOC_Os05g32070 transcription factor (SRS) 0.02 OrthoFinder output from all 47 species
Len_g31120 SHI SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Mp3g19510.1 SHI transcription factor (SRS) 0.04 OrthoFinder output from all 47 species
Msp_g32313 SHI SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16685 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59296 SHI SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013968 SHI SRS-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0150.g023316 SRS1, STY1 not classified & original description: CDS=12-590 0.03 OrthoFinder output from all 47 species
Solyc02g062400.3.1 SRS1, STY1,... transcription factor (SRS) 0.04 OrthoFinder output from all 47 species
Solyc02g084680.3.1 SRS1, STY1,... transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Solyc10g054070.1.1 SRS5, Solyc10g054070 transcription factor (SRS) 0.02 OrthoFinder output from all 47 species
Spa_g50442 SHI SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g29778 SRS1, STY1 SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30774 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004006_P001 SHI, Zm00001e004006 transcription factor (SRS) 0.04 OrthoFinder output from all 47 species
Zm00001e010227_P001 SRS1, STY1,... transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Zm00001e013256_P002 SHI, Zm00001e013256 transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Zm00001e024681_P001 SHI, Zm00001e024681 transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Zm00001e026854_P001 SHI, Zm00001e026854 transcription factor (SRS) 0.02 OrthoFinder output from all 47 species
Zm00001e030189_P001 SHI, Zm00001e030189 transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Zm00001e031567_P001 LRP1, Zm00001e031567 transcription factor (SRS) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!