1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_17736g0010

MA_17736g0010 (RPN12a)


Aliases : RPN12a

Description : regulatory component RPN12 of 26S proteasome


Gene families : OG0004469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004469_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_17736g0010
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
AT1G64520 RPN12a regulatory particle non-ATPase 12A 0.08 OrthoFinder output from all 47 species
Ala_g14019 RPN12a regulatory component *(RPN12) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Ceric.37G039700.1 RPN12a, Ceric.37G039700 regulatory component *(RPN12) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000545.18 RPN12a Protein degradation.26S proteasome.regulatory... 0.07 OrthoFinder output from all 47 species
Cre17.g708300 RPN12a Protein degradation.26S proteasome.regulatory... 0.1 OrthoFinder output from all 47 species
Dac_g17594 RPN12a regulatory component *(RPN12) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Dde_g20460 RPN12a regulatory component *(RPN12) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
LOC_Os07g25420.1 RPN12a, LOC_Os07g25420 regulatory component RPN12 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Len_g22597 RPN12a regulatory component *(RPN12) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Mp5g15930.1 RPN12a regulatory component RPN12 of 26S proteasome 0.05 OrthoFinder output from all 47 species
Nbi_g06575 RPN12a regulatory component *(RPN12) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Solyc08g082700.3.1 RPN12a, Solyc08g082700 regulatory component RPN12 of 26S proteasome 0.07 OrthoFinder output from all 47 species
Spa_g09640 RPN12a regulatory component *(RPN12) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Spa_g44782 RPN12a regulatory component *(RPN12) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Zm00001e016574_P001 RPN12a, Zm00001e016574 regulatory component RPN12 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Zm00001e040025_P001 RPN12a, Zm00001e040025 regulatory component RPN12 of 26S proteasome 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP HCCA
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0030488 tRNA methylation IEP HCCA
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0034708 methyltransferase complex IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
CC GO:0043527 tRNA methyltransferase complex IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR033464 CSN8_PSD8_EIF3K 75 214
No external refs found!