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MA_136047g0010 (emb1629, APO2)


Aliases : emb1629, APO2

Description : APO protein 2, chloroplastic OS=Arabidopsis thaliana (sp|q8w4a5|apo2_arath : 401.0)


Gene families : OG0001840 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001840_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_136047g0010

Target Alias Description ECC score Gene Family Method Actions
Adi_g048690 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75124 APO1 organelle RNA splicing factor *(APO) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08716 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26163 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g17568 APO1 organelle RNA splicing factor *(APO) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01023615001 emb1629, APO2 APO protein 2, chloroplastic OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_29513 APO1 APO protein 1, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_36551 emb1629, APO2 APO protein 2, chloroplastic OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g26504 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00939 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17813 No alias organelle RNA splicing factor *(APO) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g005570.4.1 emb1629, APO2,... APO protein 2, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR023342 APO_dom 58 255
IPR023342 APO_dom 291 407
No external refs found!