MA_133396g0010 (ATWRKY50, WRKY50)

Aliases : ATWRKY50, WRKY50

Description : transcription factor (WRKY)

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_133396g0010
Cluster	HCCA: Cluster_107

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00015p00181570	WRKY6, ATWRKY6,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AMTR_s00065p00201830	ATWRKY40,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AT1G69310	ATWRKY57, WRKY57	WRKY DNA-binding protein 57	0.03	OrthoFinder output from all 47 species
AT4G23810	WRKY53, ATWRKY53	WRKY family transcription factor	0.02	OrthoFinder output from all 47 species
Als_g20798	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g07826	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g41346	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g50197	WRKY9, ATWRKY9	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g16660	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01018300001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01020060001	WRKY72, ATWRKY72	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01022245001	ATWRKY51, WRKY51	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01022259001	ATWRKY13, WRKY13	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
LOC_Os01g46800.1	WRKY53,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os05g40070.1	ATWRKY64,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os05g45230.1	WRKY43,...	transcription factor (WRKY)	0.06	OrthoFinder output from all 47 species
LOC_Os11g45920.1	WRKY26, LOC_Os11g45920	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Len_g07502	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Len_g20076	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Len_g29683	WRKY56, ATWRKY56	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Len_g40222	WRKY55, ATWRKY55	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g24898	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_164675g0010	WRKY42, AtWRKY42	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
MA_23415g0010	ATWRKY50, WRKY50	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_47307g0010	WRKY42, AtWRKY42	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_496691g0010	ATWRKY59, WRKY59	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
MA_654670g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_740729g0010	ATWRKY50, WRKY50	transcription factor (WRKY)	0.06	OrthoFinder output from all 47 species
Ppi_g31084	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g63321	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Smo29146	WRKY6, ATWRKY6	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
Smo69423	ATWRKY57, WRKY57	RNA biosynthesis.transcriptional activation.WRKY...	0.05	OrthoFinder output from all 47 species
Solyc03g095770.3.1	ATWRKY70,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc06g048870.3.1	WRKY55,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e025937_P001	WRKY72,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e027804_P001	WRKY9, ATWRKY9,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e027989_P001	WRKY53,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0002831	regulation of response to biotic stimulus	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0010112	regulation of systemic acquired resistance	IEP	HCCA
BP	GO:0031347	regulation of defense response	IEP	HCCA
BP	GO:0032101	regulation of response to external stimulus	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
BP	GO:0080134	regulation of response to stress	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	159	216

External Links

No external refs found!

MA_133396g0010 (ATWRKY50, WRKY50)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation