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  5. MA_10436996g0010

MA_10436996g0010 (PBB2)


Aliases : PBB2

Description : component beta type-2 of 26S proteasome


Gene families : OG0004022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004022_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10436996g0010
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
AT3G27430 PBB1 N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.03 OrthoFinder output from all 47 species
Adi_g012435 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Adi_g085742 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Aev_g27947 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Aop_g04145 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aop_g24955 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000485 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.07 OrthoFinder output from all 47 species
Cre10.g424400 PBB1 Protein degradation.26S proteasome.20S core... 0.1 OrthoFinder output from all 47 species
Dac_g04547 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Dcu_g02516 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Dde_g05731 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
GSVIVT01000574001 PBB2 Protein degradation.26S proteasome.20S core... 0.02 OrthoFinder output from all 47 species
Gb_35125 PBB2 component beta type-2 of 26S proteasome 0.06 OrthoFinder output from all 47 species
LOC_Os05g09490.1 PBB1, LOC_Os05g09490 component beta type-2 of 26S proteasome 0.1 OrthoFinder output from all 47 species
Len_g01148 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Lfl_g00695 PBB1 beta-type-2 component *(PBB) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Mp1g03530.1 PBB2 component beta type-2 of 26S proteasome 0.07 OrthoFinder output from all 47 species
Msp_g07522 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Nbi_g02753 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Ppi_g08876 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Solyc04g024420.3.1 PBB2, Solyc04g024420 component beta type-2 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Solyc05g013820.4.1 PBB1, Solyc05g013820 component beta type-2 of 26S proteasome 0.11 OrthoFinder output from all 47 species
Spa_g16137 PBB1 beta-type-2 component *(PBB) of 26S proteasome &... 0.07 OrthoFinder output from all 47 species
Spa_g16138 PBB1 beta-type-2 component *(PBB) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Zm00001e029814_P002 PBB1, Zm00001e029814 component beta type-2 of 26S proteasome 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 65 245
No external refs found!