MA_10436820g0010


Description : FRIGIDA-like protein 3 OS=Arabidopsis thaliana (sp|q67zb3|frl3_arath : 281.0)


Gene families : OG0000898 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000898_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10436820g0010

Target Alias Description ECC score Gene Family Method Actions
Aev_g12396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06358 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G038800.1 Ceric.23G038800 not classified & original description: pacid=50609666... 0.03 OrthoFinder output from all 47 species
Ceric.37G013900.1 Ceric.37G013900 not classified & original description: pacid=50615693... 0.04 OrthoFinder output from all 47 species
Dcu_g04781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13939 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g15209 FRL2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09930 FRL2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g21938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000171001 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_24860 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_33604 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Gb_40916 No alias FRIGIDA-like protein 4a OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Len_g00652 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g00673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g02882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g09476 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g06900.1 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g04962 FRL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g10001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19358 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24033 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15398 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e033632_P002 Zm00001e033632 FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e035443_P001 Zm00001e035443 FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006177 GMP biosynthetic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0046037 GMP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR012474 Frigida 1 277
No external refs found!