MA_10430581g0010 (ATCRSH, CRSH)

Aliases : ATCRSH, CRSH

Description : Probable GTP diphosphokinase CRSH, chloroplastic OS=Arabidopsis thaliana (sp|q84r11|crsh_arath : 424.0)

Gene families : OG0003616 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003616_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10430581g0010

Target	Alias	Description	ECC score	Gene Family Method
AT3G17470	ATCRSH, CRSH	Ca2+-activated RelA/spot homolog	0.03	OrthoFinder output from all 47 species
Adi_g014580	ATCRSH, CRSH	ppGpp synthetase *(CRSH) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g14942	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g20629	ATCRSH, CRSH	ppGpp synthetase *(CRSH) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g08360	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Als_g17646	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g16932	ATCRSH, CRSH	ppGpp synthetase *(CRSH) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g26038	ATCRSH, CRSH	ppGpp synthetase *(CRSH) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g16009	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.30G071200.1	Ceric.30G071200	not classified & original description: pacid=50608643...	0.02	OrthoFinder output from all 47 species
Dcu_g02034	ATCRSH, CRSH	ppGpp synthetase *(CRSH) & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g24495	ATCRSH, CRSH	ppGpp synthetase *(CRSH) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g10366	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Mp1g27830.1	ATCRSH, CRSH	Probable GTP diphosphokinase CRSH, chloroplastic...	0.04	OrthoFinder output from all 47 species
Msp_g47140	ATCRSH, CRSH	ppGpp synthetase *(CRSH) & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g10383	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g25480	ATCRSH, CRSH	ppGpp synthetase *(CRSH) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g06700	ATCRSH, CRSH	ppGpp synthetase *(CRSH) & original description: none	0.06	OrthoFinder output from all 47 species
Ppi_g18830	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Solyc12g098920.2.1	ATCRSH, CRSH,...	Probable GTP diphosphokinase CRSH, chloroplastic...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEA	Interproscan
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0033865	nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007685	RelA_SpoT	247	368

External Links

No external refs found!

MA_10430581g0010 (ATCRSH, CRSH)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation