Aliases : AFB2
Description : Protein AUXIN SIGNALING F-BOX 3 OS=Arabidopsis thaliana (sp|q9lpw7|afb3_arath : 269.0)
Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G62980 | TIR1 | F-box/RNI-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
Adi_g057088 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.02 | OrthoFinder output from all 47 species | |
Als_g07783 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g04355 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.04 | OrthoFinder output from all 47 species | |
Aob_g11099 | TIR1 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.05G036600.1 | COI1, Ceric.05G036600 | component *(COI) of jasmonic acid receptor complex &... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g01640 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g01652 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g02828 | COI1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01023363001 | No alias | Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Gb_14175 | AFB5 | component TIR1/AFB of auxin receptor complex. component... | 0.02 | OrthoFinder output from all 47 species | |
Len_g15985 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g06163 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g06224 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g10546 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.03 | OrthoFinder output from all 47 species | |
MA_47869g0020 | No alias | F-box protein FBX14 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
Mp2g26590.1 | COI1 | component COI of jasmonic acid receptor complex | 0.02 | OrthoFinder output from all 47 species | |
Msp_g07144 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g16353 | COI1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g24051 | No alias | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g49637 | No alias | component *(COI) of jasmonic acid receptor complex &... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g06750 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.05 | OrthoFinder output from all 47 species | |
Spa_g20191 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g28126 | COI1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g50974 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e026935_P001 | COI1, Zm00001e026935 | component COI of jasmonic acid receptor complex | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e031742_P001 | COI1, Zm00001e031742 | component COI of jasmonic acid receptor complex | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
CC | GO:0005669 | transcription factor TFIID complex | IEP | HCCA |
BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |