MA_10067279g0010


Description : AAA-ATPase At5g57480 OS=Arabidopsis thaliana (sp|q9fkm3|aatpk_arath : 385.0)


Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10067279g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00241930 BCS1,... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00216540 evm_27.TU.AmTr_v1... AAA-ATPase At5g57480 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00244450 evm_27.TU.AmTr_v1... AAA-ATPase At3g28510 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00244830 AATP1,... AAA-ATPase At3g50940 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00024p00191310 evm_27.TU.AmTr_v1... AAA-ATPase At4g30250 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT2G18193 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT3G28510 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT3G28540 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 OrthoFinder output from all 47 species
AT3G28600 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT5G17730 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT5G40000 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
Adi_g016569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g054385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g077316 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115155 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g05390 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g07534 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g08283 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17775 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12041 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15221 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38293 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06267 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g32826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36939 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06417.t1 Aspi01Gene06417 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06431.t1 Aspi01Gene06431 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene30040.t1 Aspi01Gene30040 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72894.t1 Aspi01Gene72894 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0059.g034525 No alias not classified & original description: CDS=1-2166 0.03 OrthoFinder output from all 47 species
Ceric.06G084000.1 Ceric.06G084000 not classified & original description: pacid=50619247... 0.02 OrthoFinder output from all 47 species
Ceric.19G071000.1 Ceric.19G071000 not classified & original description: pacid=50575763... 0.02 OrthoFinder output from all 47 species
Ceric.19G071300.1 Ceric.19G071300 not classified & original description: pacid=50576608... 0.03 OrthoFinder output from all 47 species
Ceric.19G071600.1 Ceric.19G071600 not classified & original description: pacid=50575855... 0.03 OrthoFinder output from all 47 species
Ceric.19G071900.1 Ceric.19G071900 not classified & original description: pacid=50575289... 0.03 OrthoFinder output from all 47 species
Dac_g09976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g46255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05212 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g05632 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g42407 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11177 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16997 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g29814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001352001 No alias AAA-ATPase At4g30250 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01010368001 No alias AAA-ATPase At3g50940 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01010371001 BCS1 AAA-ATPase At5g17760 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01029545001 No alias AAA-ATPase At3g50940 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01032552001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01032557001 AATP1 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_11779 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Gb_27802 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_34238 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g42030.1 BCS1, LOC_Os01g42030 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os01g45450.1 LOC_Os01g45450 AAA-ATPase At5g17740 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g02330.1 LOC_Os03g02330 AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os03g38800.1 LOC_Os03g38800 AAA-ATPase At5g17740 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g58800.1 AATP1, LOC_Os03g58800 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os06g48240.1 LOC_Os06g48240 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os06g48250.1 LOC_Os06g48250 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os07g09420.1 LOC_Os07g09420 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os07g09470.1 LOC_Os07g09470 AAA-ATPase At3g28610 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os07g09490.1 AATP1, LOC_Os07g09490 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os09g27340.1 LOC_Os09g27340 AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os10g22700.1 LOC_Os10g22700 AAA-ATPase At3g50940 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g28137.1 AATP1, LOC_Os12g28137 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os12g28177.1 AATP1, LOC_Os12g28177 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os12g28590.1 AATP1, LOC_Os12g28590 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g44220.1 AATP1, LOC_Os12g44220 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Len_g13406 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g28817 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436428g0010 No alias AAA-ATPase At3g28610 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_161279g0020 No alias AAA-ATPase At3g28610 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_28097g0010 BCS1 AAA-ATPase At3g28610 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_296237g0020 BCS1 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
MA_344969g0010 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g10169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11172 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g28074 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g39245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g42642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09594 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo419965 No alias AAA-ATPase At4g30250 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc03g033790.4.1 BCS1, Solyc03g033790 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc03g033840.4.1 BCS1, Solyc03g033840 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g42317 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49606 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e003357_P001 AATP1, Zm00001e003357 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e006040_P001 AATP1, Zm00001e006040 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e007733_P001 AATP1, Zm00001e007733 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e011416_P001 Zm00001e011416 AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e012527_P001 Zm00001e012527 AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e020637_P001 BCS1, Zm00001e020637 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e027961_P001 Zm00001e027961 AAA-ATPase At3g50940 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e033043_P001 Zm00001e033043 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e038158_P001 AATP1, Zm00001e038158 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 79 219
No external refs found!