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  5. MA_10061366g0010

MA_10061366g0010


Description : IMB4 nucleocytoplasmic import karyopherin


Gene families : OG0005260 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005260_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10061366g0010
Cluster HCCA: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00059110 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
AT4G27640 No alias ARM repeat superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g008189 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.03 OrthoFinder output from all 47 species
Ala_g03927 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.05 OrthoFinder output from all 47 species
Als_g05135 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.03 OrthoFinder output from all 47 species
Aob_g12570 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.03 OrthoFinder output from all 47 species
Ceric.27G000100.1 Ceric.27G000100 nucleocytoplasmic import karyopherin *(IMB4) & original... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000237.33 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
Dcu_g04972 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.1 OrthoFinder output from all 47 species
GSVIVT01022879001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.12 OrthoFinder output from all 47 species
Len_g14349 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.06 OrthoFinder output from all 47 species
Lfl_g10041 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.03 OrthoFinder output from all 47 species
Mp1g01470.1 No alias IMB4 nucleocytoplasmic import karyopherin 0.02 OrthoFinder output from all 47 species
Tin_g15675 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e001127_P004 Zm00001e001127 IMB4 nucleocytoplasmic import karyopherin 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR000357 HEAT 222 251
No external refs found!