Pp3c6_28550V3.1 (Pp3c6_28550)

Aliases : Pp3c6_28550

Description : No annotation

Gene families : OG0000220 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000220_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c6_28550V3.1
Cluster	HCCA: Cluster_46

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene46600.t1	Aspi01Gene46600	heavy chain of Dynein microtubule-based motor protein...	0.02	OrthoFinder output from all 47 species
Azfi_s0212.g058152	No alias	heavy chain of Dynein microtubule-based motor protein...	0.02	OrthoFinder output from all 47 species
Ceric.1Z068500.1	Ceric.1Z068500	heavy chain of Dynein microtubule-based motor protein...	0.02	OrthoFinder output from all 47 species
Ceric.25G018200.1	Ceric.25G018200	not classified & original description: pacid=50594702...	0.01	OrthoFinder output from all 47 species
Ceric.25G028800.1	Ceric.25G028800	heavy chain of Dynein microtubule-based motor protein...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000042.101	No alias	Dynein beta chain, flagellar outer arm OS=Chlamydomonas...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000042.99	No alias	Dynein beta chain, flagellar outer arm OS=Chlamydomonas...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000056.27	No alias	Cytoskeleton.microtubular network.Dynein...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000142.6	No alias	No description available	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000142.7	No alias	Cytoskeleton.microtubular network.Dynein...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000142.8	No alias	RNA processing.RNA splicing.U2-type-intron-specific...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000169.13	No alias	Dynein-1-beta heavy chain, flagellar inner arm I1...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000194.64	No alias	Dynein-1-alpha heavy chain, flagellar inner arm I1...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000248.41	No alias	Dynein-1-alpha heavy chain, flagellar inner arm I1...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000404.38	No alias	Cytoskeleton.microtubular network.Dynein...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000828.12	No alias	Cytoskeleton.microtubular network.Dynein...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001206.27	No alias	Dynein-1-alpha heavy chain, flagellar inner arm I1...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001206.29	No alias	Dynein-1-beta heavy chain, flagellar inner arm I1...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001206.30	No alias	Dynein-1-beta heavy chain, flagellar inner arm I1...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020684.47	ACBP4	Cytoskeleton.microtubular network.Dynein...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020723.67	No alias	Cytoskeleton.microtubular network.Dynein...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020943.88	No alias	Cytoskeleton.microtubular network.Dynein...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021017.28	No alias	Dynein gamma chain, flagellar outer arm OS=Chlamydomonas...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00022075.30	No alias	Cytoskeleton.microtubular network.Dynein...	0.01	OrthoFinder output from all 47 species
Cre02.g107050	No alias	Cytoskeleton.microtubular network.Dynein...	0.01	OrthoFinder output from all 47 species
Cre02.g141606	No alias	Cytoskeleton.microtubular network.Dynein...	0.01	OrthoFinder output from all 47 species
Cre03.g145127	No alias	Cytoskeleton.microtubular network.Dynein...	0.02	OrthoFinder output from all 47 species
Cre05.g244250	No alias	Cytoskeleton.microtubular network.Dynein...	0.03	OrthoFinder output from all 47 species
Cre06.g250300	No alias	Cytoskeleton.microtubular network.Dynein...	0.03	OrthoFinder output from all 47 species
Cre09.g392282	No alias	Cytoskeleton.microtubular network.Dynein...	0.03	OrthoFinder output from all 47 species
Cre09.g403800	No alias	Cytoskeleton.microtubular network.Dynein...	0.02	OrthoFinder output from all 47 species
Cre11.g476050	No alias	Cytoskeleton.microtubular network.Dynein...	0.02	OrthoFinder output from all 47 species
Cre12.g484250	No alias	Cytoskeleton.microtubular network.Dynein...	0.03	OrthoFinder output from all 47 species
Cre14.g624950	No alias	Cytoskeleton.microtubular network.Dynein...	0.03	OrthoFinder output from all 47 species
Cre14.g627576	No alias	Cytoskeleton.microtubular network.Dynein...	0.03	OrthoFinder output from all 47 species
Cre16.g685450	No alias	Cytoskeleton.microtubular network.Dynein...	0.03	OrthoFinder output from all 47 species
Gb_31253	No alias	Dynein-1-beta heavy chain, flagellar inner arm I1...	0.01	OrthoFinder output from all 47 species
Mp2g07870.1	No alias	heavy chain of Dynein microtubule-based motor protein complex	0.01	OrthoFinder output from all 47 species
Mp8g13870.1	No alias	heavy chain of Dynein microtubule-based motor protein complex	0.01	OrthoFinder output from all 47 species
Pnu_g23794	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0060.g015235	No alias	heavy chain of Dynein microtubule-based motor protein...	0.02	OrthoFinder output from all 47 species
Smo76047	No alias	Cytoskeleton.microtubular network.Dynein...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003774	cytoskeletal motor activity	None	Extended
MF	GO:0003777	microtubule motor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005875	microtubule associated complex	None	Extended
BP	GO:0007017	microtubule-based process	None	Extended
BP	GO:0007018	microtubule-based movement	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
CC	GO:0030286	dynein complex	IEA	Interproscan
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
BP	GO:0010970	transport along microtubule	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
BP	GO:0030705	cytoskeleton-dependent intracellular transport	IEP	HCCA
BP	GO:0031503	protein-containing complex localization	IEP	HCCA
BP	GO:0042073	intraciliary transport	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0099111	microtubule-based transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041466	Dynein_AAA5_ext	1586	1712
IPR041589	DNAH3_AAA_lid_1	1933	2013
IPR041228	Dynein_C	3482	3785
IPR013602	Dynein_heavy_linker	564	965
IPR024317	Dynein_heavy_chain_D4_dom	2078	2337
IPR041658	AAA_lid_11	3312	3476
IPR035706	AAA_9	2726	2946
IPR035699	AAA_6	1093	1419
IPR024743	Dynein_HC_stalk	2351	2696
IPR004273	Dynein_heavy_D6_P-loop	3191	3311

External Links

No external refs found!

Pp3c6_28550V3.1 (Pp3c6_28550)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation