Pp3c2_32150V3.1 (WRKY48, ATWRKY48, Pp3c2_32150)

Aliases : WRKY48, ATWRKY48, Pp3c2_32150

Description : WRKY DNA-binding protein 4

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c2_32150V3.1

Target	Alias	Description	ECC score	Gene Family Method
Aob_g30328	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g26276	WRKY56, ATWRKY56	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Dac_g20883	WRKY55, ATWRKY55	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Len_g10997	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Mp4g00200.1	WRKY6, ATWRKY6	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Nbi_g17523	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Ore_g23997	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Sam_g50657	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	177	234

External Links

No external refs found!

Pp3c2_32150V3.1 (WRKY48, ATWRKY48, Pp3c2_32150)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation