Pp3c27_2710V3.1 (COS1, Pp3c27_2710)

Aliases : COS1, Pp3c27_2710

Description : 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase

Gene families : OG0004186 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004186_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c27_2710V3.1
Cluster	HCCA: Cluster_23

Target	Alias	Description	ECC score	Gene Family Method
Ceric.26G026400.1	COS1, Ceric.26G026400	EC_2.5 transferase transferring alkyl or aryl group,...	0.01	OrthoFinder output from all 47 species
LOC_Os04g42000.1	COS1, LOC_Os04g42000	lumazine synthase (RibE)	0.01	OrthoFinder output from all 47 species
Lfl_g36508	COS1	EC_2.5 transferase transferring alkyl or aryl group,...	0.01	OrthoFinder output from all 47 species
Solyc12g096590.3.1	COS1, Solyc12g096590	lumazine synthase (RibE)	0.01	OrthoFinder output from all 47 species
Tin_g00466	COS1	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006766	vitamin metabolic process	None	Extended
BP	GO:0006767	water-soluble vitamin metabolic process	None	Extended
BP	GO:0006771	riboflavin metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009110	vitamin biosynthetic process	None	Extended
BP	GO:0009231	riboflavin biosynthetic process	IEA	Interproscan
CC	GO:0009349	riboflavin synthase complex	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042364	water-soluble vitamin biosynthetic process	None	Extended
BP	GO:0042726	flavin-containing compound metabolic process	None	Extended
BP	GO:0042727	flavin-containing compound biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000105	histidine biosynthetic process	IEP	HCCA
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0004834	tryptophan synthase activity	IEP	HCCA
CC	GO:0005741	mitochondrial outer membrane	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006547	histidine metabolic process	IEP	HCCA
BP	GO:0006568	tryptophan metabolic process	IEP	HCCA
BP	GO:0006576	biogenic amine metabolic process	IEP	HCCA
BP	GO:0006586	indolalkylamine metabolic process	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0009072	aromatic amino acid metabolic process	IEP	HCCA
BP	GO:0009308	amine metabolic process	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA
BP	GO:0042430	indole-containing compound metabolic process	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002180	LS/RS	86	224

External Links

No external refs found!

Pp3c27_2710V3.1 (COS1, Pp3c27_2710)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation