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  5. Pp3c17_18010V3.1

Pp3c17_18010V3.1 (Pp3c17_18010)


Aliases : Pp3c17_18010

Description : Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein


Gene families : OG0002183 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002183_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c17_18010V3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00103630 evm_27.TU.AmTr_v1... RNA processing.RNA modification.rRNA/tRNA... 0.02 OrthoFinder output from all 47 species
AMTR_s00043p00189790 evm_27.TU.AmTr_v1... RNA processing.RNA modification.rRNA/tRNA... 0.04 OrthoFinder output from all 47 species
AT4G12600 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.02 OrthoFinder output from all 47 species
AT4G22380 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.01 OrthoFinder output from all 47 species
AT5G20160 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.07 OrthoFinder output from all 47 species
Ala_g06081 No alias component *(Snu13) of snoRNP rRNA methylation complex &... 0.01 OrthoFinder output from all 47 species
Als_g45351 No alias component *(Snu13) of snoRNP rRNA methylation complex &... 0.01 OrthoFinder output from all 47 species
Azfi_s0280.g062289 No alias component *(Snu13) of snoRNP rRNA methylation complex &... 0.01 OrthoFinder output from all 47 species
Ceric.03G070800.1 Ceric.03G070800 component *(Snu13) of snoRNP rRNA methylation complex &... 0.04 OrthoFinder output from all 47 species
Ceric.03G071400.1 Ceric.03G071400 component *(Snu13) of snoRNP rRNA methylation complex &... 0.02 OrthoFinder output from all 47 species
Cre06.g249250 No alias RNA processing.RNA modification.rRNA/tRNA... 0.04 OrthoFinder output from all 47 species
GSVIVT01015520001 No alias RNA processing.RNA modification.rRNA/tRNA... 0.03 OrthoFinder output from all 47 species
Gb_01849 No alias protein factor NHP2L1/SNU13 of U4/U6 small nuclear... 0.03 OrthoFinder output from all 47 species
LOC_Os03g13800.1 LOC_Os03g13800 protein factor NHP2L1/SNU13 of U4/U6 small nuclear... 0.04 OrthoFinder output from all 47 species
LOC_Os10g03540.1 LOC_Os10g03540 protein factor NHP2L1/SNU13 of U4/U6 small nuclear... 0.02 OrthoFinder output from all 47 species
Len_g54239 No alias component *(Snu13) of snoRNP rRNA methylation complex &... 0.01 OrthoFinder output from all 47 species
MA_16906g0010 No alias protein factor NHP2L1/SNU13 of U4/U6 small nuclear... 0.05 OrthoFinder output from all 47 species
MA_433779g0010 No alias protein factor NHP2L1/SNU13 of U4/U6 small nuclear... 0.04 OrthoFinder output from all 47 species
Sam_g08742 No alias component *(Snu13) of snoRNP rRNA methylation complex &... 0.04 OrthoFinder output from all 47 species
Sam_g08743 No alias component *(Snu13) of snoRNP rRNA methylation complex &... 0.02 OrthoFinder output from all 47 species
Smo159569 No alias RNA processing.RNA modification.rRNA/tRNA... 0.03 OrthoFinder output from all 47 species
Solyc09g011420.3.1 Solyc09g011420 protein factor NHP2L1/SNU13 of U4/U6 small nuclear... 0.01 OrthoFinder output from all 47 species
Tin_g30682 No alias component *(Snu13) of snoRNP rRNA methylation complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e001004_P001 Zm00001e001004 protein factor NHP2L1/SNU13 of U4/U6 small nuclear... 0.03 OrthoFinder output from all 47 species
Zm00001e038611_P002 Zm00001e038611 protein factor NHP2L1/SNU13 of U4/U6 small nuclear... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 24 111
No external refs found!