Pp3c16_13120V3.1 (CHI, Pp3c16_13120)

Aliases : CHI, Pp3c16_13120

Description : chitinase, putative

Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c16_13120V3.1

Target	Alias	Description	ECC score	Gene Family Method
Aev_g02874	HCHIB, B-CHI,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aev_g38851	HCHIB, B-CHI,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene23822.t1	ATEP3, EP3,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene32076.t1	ATEP3, EP3,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene32079.t1	ATEP3, EP3,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_656046g0010	No alias	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
Pir_g47109	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Smo428512	No alias	No description available	0.01	OrthoFinder output from all 47 species
Smo446851	HCHIB, B-CHI,...	Endochitinase A2 OS=Pisum sativum	0.02	OrthoFinder output from all 47 species
Solyc04g072000.4.1	ATEP3, EP3,...	Endochitinase EP3 OS=Arabidopsis thaliana...	0.01	OrthoFinder output from all 47 species
Solyc10g055800.2.1	HCHIB, B-CHI,...	Basic 30 kDa endochitinase OS=Solanum lycopersicum...	0.02	OrthoFinder output from all 47 species
Spa_g10007	ATEP3, EP3,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004568	chitinase activity	IEA	Interproscan
BP	GO:0006022	aminoglycan metabolic process	None	Extended
BP	GO:0006026	aminoglycan catabolic process	None	Extended
BP	GO:0006030	chitin metabolic process	None	Extended
BP	GO:0006032	chitin catabolic process	IEA	Interproscan
BP	GO:0006040	amino sugar metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0016998	cell wall macromolecule catabolic process	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0046348	amino sugar catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901071	glucosamine-containing compound metabolic process	None	Extended
BP	GO:1901072	glucosamine-containing compound catabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000726	Glyco_hydro_19_cat	56	110

External Links

No external refs found!

Pp3c16_13120V3.1 (CHI, Pp3c16_13120)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation