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  5. Pp3c13_7630V3.1

Pp3c13_7630V3.1 (Pp3c13_7630)


Aliases : Pp3c13_7630

Description : sodium/calcium exchanger family protein / calcium-binding EF hand family protein


Gene families : OG0000757 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000757_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c13_7630V3.1
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
Ceric.1Z041000.1 Ceric.1Z041000 cation exchanger *(NCL/EF-CAX) & original description:... 0.02 OrthoFinder output from all 47 species
Ore_g32866 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g13051 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.01 OrthoFinder output from all 47 species
Smo177778 No alias Solute transport.carrier-mediated transport.CDF... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 322 390
IPR004837 NaCa_Exmemb 463 602
No external refs found!