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  5. Pp3c12_24000V3.1

Pp3c12_24000V3.1 (Pp3c12_24000)


Aliases : Pp3c12_24000

Description : Pectin lyase-like superfamily protein


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_24000V3.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00264370 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00027p00247950 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
AMTR_s00028p00077900 QRT1,... Cell wall.pectin.homogalacturonan.modification and... 0.01 OrthoFinder output from all 47 species
AMTR_s00106p00092510 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
AT5G18990 No alias Pectin lyase-like superfamily protein 0.01 OrthoFinder output from all 47 species
AT5G19730 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G26810 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003309 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g105814 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g127146 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g10289 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g19093 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g41068 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g16581 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20050 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g26631 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Als_g07065 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08007 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Als_g12101 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47598 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Als_g47599 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11400 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g16629 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02507 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07992 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11491 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g16751 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20021 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20602 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g21373 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g22415 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g30459 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g56742 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g58922 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g69965 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene05718.t1 Aspi01Gene05718 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05795.t1 Aspi01Gene05795 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16818.t1 Aspi01Gene16818 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16842.t2 Aspi01Gene16842 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20189.t1 Aspi01Gene20189 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24083.t2 Aspi01Gene24083 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33566.t1 Aspi01Gene33566 pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene59341.t1 Aspi01Gene59341 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene59342.t1 Aspi01Gene59342 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene59344.t1 Aspi01Gene59344 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene59346.t1 Aspi01Gene59346 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene59353.t1 Aspi01Gene59353 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67011.t1 Aspi01Gene67011 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene70538.t1 Aspi01Gene70538 pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene71978.t1 Aspi01Gene71978 pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0002.g001228 No alias pectin methylesterase & original description: CDS=1-1122 0.01 OrthoFinder output from all 47 species
Azfi_s0003.g008131 No alias pectin methylesterase & original description: CDS=1-870 0.02 OrthoFinder output from all 47 species
Azfi_s0648.g080900 No alias pectin methylesterase & original description: CDS=62-1303 0.01 OrthoFinder output from all 47 species
Cba_g05738 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G008900.1 Ceric.03G008900 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.05G031400.1 Ceric.05G031400 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.10G071200.1 Ceric.10G071200 pectin methylesterase & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.14G062500.1 Ceric.14G062500 pectin methylesterase & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.24G024700.1 Ceric.24G024700 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.39G035900.1 Ceric.39G035900 pectin methylesterase & original description:... 0.01 OrthoFinder output from all 47 species
Dac_g00830 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g05020 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07534 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g11068 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11820 No alias EC_3.1 hydrolase acting on ester bond & original... 0.01 OrthoFinder output from all 47 species
Dac_g15161 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g17627 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35272 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06266 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g11351 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g28954 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36178 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g42904 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g44261 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g51244 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13696 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g27753 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g38152 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46321 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g47291 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13571 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17111 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01028170001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.01 OrthoFinder output from all 47 species
GSVIVT01031250001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.01 OrthoFinder output from all 47 species
Gb_17798 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Gb_39595 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os01g19440.1 LOC_Os01g19440 pectin methylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os04g46740.1 LOC_Os04g46740 pectin methylesterase 0.01 OrthoFinder output from all 47 species
LOC_Os05g44600.1 LOC_Os05g44600 pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os09g39760.1 LOC_Os09g39760 pectin methylesterase 0.01 OrthoFinder output from all 47 species
Len_g02282 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g07516 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g07605 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g12450 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g29036 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g53837 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Len_g56779 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g09832 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g19805 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g40175 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10267810g0010 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_10428207g0020 No alias Probable pectinesterase 53 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10428610g0010 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_14449g0010 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_18312g0010 ATPE11, PE11 pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_304854g0010 ATPE11, PE11 pectin methylesterase 0.01 OrthoFinder output from all 47 species
MA_6149868g0010 No alias pectin methylesterase 0.01 OrthoFinder output from all 47 species
MA_87592g0010 ATPE11, PE11 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp2g01420.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Msp_g06289 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g08120 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g10586 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g37315 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g38949 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g39582 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g44845 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02928 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g03614 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27443 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06428 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g27386 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g30829 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g38524 No alias EC_3.1 hydrolase acting on ester bond & original... 0.01 OrthoFinder output from all 47 species
Ore_g39490 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44819 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g20339 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g21379 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g11138 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14779 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g24799 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g25901 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g29894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31507 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g61465 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g63851 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000318 No alias pectin methylesterase & original description: CDS=1-1119 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004950 No alias pectin methylesterase & original description: CDS=716-1846 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010091 No alias pectin methylesterase & original description: CDS=1-882 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015880 No alias pectin methylesterase & original description: CDS=354-1487 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016132 No alias pectin methylesterase & original description: CDS=1-684 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020122 No alias not classified & original description: CDS=269-877 0.02 OrthoFinder output from all 47 species
Sam_g11685 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Smo81583 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
Solyc02g075620.4.1 Solyc02g075620 pectin methylesterase 0.01 OrthoFinder output from all 47 species
Solyc05g053680.1.1 Solyc05g053680 pectin methylesterase 0.01 OrthoFinder output from all 47 species
Solyc07g043240.4.1 Solyc07g043240 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Solyc07g065350.2.1 QRT1, Solyc07g065350 pectin methylesterase 0.01 OrthoFinder output from all 47 species
Spa_g10100 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g11483 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g29378 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g29457 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g29524 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g31270 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g37234 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38344 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g40908 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47305 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g49901 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49902 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g50750 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54581 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g01655 No alias pecTin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03223 No alias pecTin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g07049 No alias pecTin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08646 No alias pecTin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09242 No alias pecTin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g15602 No alias pecTin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g19866 No alias pecTin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20073 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20547 No alias pecTin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g36990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g36991 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g43829 No alias pecTin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e035522_P001 QRT1, Zm00001e035522 pectin methylesterase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 98 387
No external refs found!