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  5. Pp3c11_15750V3.1

Pp3c11_15750V3.1 (Pp3c11_15750)


Aliases : Pp3c11_15750

Description : uracil dna glycosylase


Gene families : OG0013061 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0013061_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c11_15750V3.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Pp3c10_11550V3.1 Pp3c10_11550 uracil dna glycosylase 0.02 OrthoFinder output from all 47 species
Pp3c14_3990V3.1 Pp3c14_3990 uracil dna glycosylase 0.04 OrthoFinder output from all 47 species
Pp3c16_10730V3.1 Pp3c16_10730 uracil dna glycosylase 0.03 OrthoFinder output from all 47 species
Pp3c16_12590V3.1 Pp3c16_12590 uracil dna glycosylase 0.05 OrthoFinder output from all 47 species
Pp3c19_11510V3.1 Pp3c19_11510 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c1_280V3.1 Pp3c1_280 uracil dna glycosylase 0.03 OrthoFinder output from all 47 species
Pp3c4_24930V3.1 Pp3c4_24930 uracil dna glycosylase 0.02 OrthoFinder output from all 47 species
Pp3c6_15710V3.1 Pp3c6_15710 uracil dna glycosylase 0.02 OrthoFinder output from all 47 species
Pp3c8_4630V3.1 Pp3c8_4630 uracil dna glycosylase 0.02 OrthoFinder output from all 47 species
Pp3c9_12680V3.1 UNG, ATUNG, Pp3c9_12680 RNA polymerase II large subunit 0.04 OrthoFinder output from all 47 species
Pp3c9_17820V3.1 Pp3c9_17820 uracil dna glycosylase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!