Pp3c11_11570V3.1 (Pp3c11_11570)

Aliases : Pp3c11_11570

Description : ARM repeat superfamily protein

Gene families : OG0004537 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004537_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c11_11570V3.1

Target	Alias	Description	ECC score	Gene Family Method
Aev_g24041	No alias	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.02	OrthoFinder output from all 47 species
Ala_g25081	No alias	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.01	OrthoFinder output from all 47 species
Als_g01133	No alias	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.01	OrthoFinder output from all 47 species
Azfi_s0030.g024383	No alias	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.02	OrthoFinder output from all 47 species
Cba_g11571	No alias	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.01	OrthoFinder output from all 47 species
Ceric.07G095100.1	Ceric.07G095100	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001027.19	No alias	No description available	0.02	OrthoFinder output from all 47 species
LOC_Os10g33770.1	LOC_Os10g33770	TNPO3 nucleocytoplasmic transport karyopherin	0.01	OrthoFinder output from all 47 species
Smo100270	No alias	Protein translocation.nucleus.nucleocytoplasmic...	0.01	OrthoFinder output from all 47 species
Tin_g20641	No alias	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.01	OrthoFinder output from all 47 species
Zm00001e004571_P001	Zm00001e004571	TNPO3 nucleocytoplasmic transport karyopherin	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001494	Importin-beta_N	37	103
IPR013598	Exportin-1/Importin-b-like	109	254

External Links

No external refs found!