- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : SAMT1, SAMC1
Description : solute transporter (MTCC)
Gene families : OG0003529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003529_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp8g05870.1 | |
| Cluster | HCCA: Cluster_66 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G39460 | SAMT1, SAMC1 | S-adenosylmethionine carrier 1 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0093.g043240 | SAMT1, SAMC1 | solute transporter *(MTCC) & original description: CDS=1-1059 | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020812.6 | No alias | Solute transport.carrier-mediated transport.MC-type... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021319.17 | SAMT1, SAMC1 | Solute transport.carrier-mediated transport.MC-type... | 0.04 | OrthoFinder output from all 47 species | |
| Cre06.g286250 | SAMT1, SAMC1 | Solute transport.carrier-mediated transport.MC-type... | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g38168 | SAMT1, SAMC1 | solute transporter *(MTCC) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01022254001 | SAMT1, SAMC1 | Solute transport.carrier-mediated transport.MC-type... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os05g29860.2 | SAMT1, SAMC1,... | solute transporter (MTCC) | 0.17 | OrthoFinder output from all 47 species | |
| Lfl_g02777 | SAMT1, SAMC1 | solute transporter *(MTCC) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g32185 | SAMT1, SAMC1 | solute transporter *(MTCC) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g18808 | SAMT1, SAMC1 | solute transporter *(MTCC) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g25840 | SAMT1, SAMC1 | solute transporter *(MTCC) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pp3c12_10690V3.1 | SAMT1, SAMC1,... | S-adenosylmethionine carrier 1 | 0.01 | OrthoFinder output from all 47 species | |
| Smo146160 | SAMT1, SAMC1 | Solute transport.carrier-mediated transport.MC-type... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc04g051580.4.1 | SAMT1, SAMC1,... | solute transporter (MTCC) | 0.09 | OrthoFinder output from all 47 species | |
| Tin_g12648 | SAMT1, SAMC1 | solute transporter *(MTCC) & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004827 | proline-tRNA ligase activity | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
| BP | GO:0006414 | translational elongation | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006433 | prolyl-tRNA aminoacylation | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0016311 | dephosphorylation | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0019751 | polyol metabolic process | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0043647 | inositol phosphate metabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0044282 | small molecule catabolic process | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0046164 | alcohol catabolic process | IEP | HCCA |
| BP | GO:0046174 | polyol catabolic process | IEP | HCCA |
| BP | GO:0046434 | organophosphate catabolic process | IEP | HCCA |
| BP | GO:0046838 | phosphorylated carbohydrate dephosphorylation | IEP | HCCA |
| BP | GO:0046855 | inositol phosphate dephosphorylation | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| BP | GO:0071545 | inositol phosphate catabolic process | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
| BP | GO:1901616 | organic hydroxy compound catabolic process | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| No external refs found! |