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Aliases : CLPR1, SVR2, NCLPP5
Description : non-proteolytic core component ClpR of chloroplast Clp-type protease complex
Gene families : OG0000988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000988_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g07767 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g03866 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g09550 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g00665 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g01710 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g01289 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g02995 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g22566 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g08836 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.03G040500.1 | CLPR1, SVR2,... | non-proteolytic core component *(ClpR) of chloroplast... | 0.11 | OrthoFinder output from all 47 species | |
| Dac_g06754 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g10911 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g11508 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g17058 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g02711 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g03225 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g21817 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01031146001 | No alias | Protein degradation.peptidase families.serine-type... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01037850001 | CLPR1, SVR2, NCLPP5 | Protein degradation.peptidase families.serine-type... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_12676 | No alias | non-proteolytic core component ClpR of chloroplast... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_40312 | CLPR4 | non-proteolytic core component ClpR of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g51450.1 | CLPR1, SVR2,... | non-proteolytic core component ClpR of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g08627 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g10203 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g05047 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.07 | OrthoFinder output from all 47 species | |
| Ore_g07323 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g12837 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g07357 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g12637 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c3_12000V3.1 | Pp3c3_12000 | ATP-dependent caseinolytic (Clp) protease/crotonase... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g09209 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0007.g003581 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0008.g004018 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0019.g007703 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16208 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g11689 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g12805 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | HCCA |
| BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
| BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | HCCA |
| BP | GO:0009240 | isopentenyl diphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
| MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | HCCA |
| MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | HCCA |
| MF | GO:0016726 | oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor | IEP | HCCA |
| BP | GO:0019288 | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | IEP | HCCA |
| BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
| BP | GO:0019682 | glyceraldehyde-3-phosphate metabolic process | IEP | HCCA |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| MF | GO:0033743 | peptide-methionine (R)-S-oxide reductase activity | IEP | HCCA |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046490 | isopentenyl diphosphate metabolic process | IEP | HCCA |
| BP | GO:0050992 | dimethylallyl diphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0050993 | dimethylallyl diphosphate metabolic process | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| MF | GO:0051745 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023562 | ClpP/TepA | 183 | 364 |
| No external refs found! |