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  5. Mp7g10810.1

Mp7g10810.1 (PTAC14)


Aliases : PTAC14

Description : PAP7/TAC14 cofactor of plastid-encoded RNA polymerase


Gene families : OG0004603 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004603_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp7g10810.1
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AT4G20130 PTAC14 plastid transcriptionally active 14 0.14 OrthoFinder output from all 47 species
Aev_g31785 PTAC14 cofactor of plastid-encoded RNA polymerase *(PAP7/TAC14)... 0.02 OrthoFinder output from all 47 species
Aop_g08207 PTAC14 cofactor of plastid-encoded RNA polymerase *(PAP7/TAC14)... 0.01 OrthoFinder output from all 47 species
Azfi_s0027.g023488 PTAC14 cofactor of plastid-encoded RNA polymerase *(PAP7/TAC14)... 0.02 OrthoFinder output from all 47 species
Ceric.04G027900.1 PTAC14, Ceric.04G027900 cofactor of plastid-encoded RNA polymerase *(PAP7/TAC14)... 0.08 OrthoFinder output from all 47 species
Dcu_g10202 PTAC14 cofactor of plastid-encoded RNA polymerase *(PAP7/TAC14)... 0.02 OrthoFinder output from all 47 species
Dde_g06786 PTAC14 cofactor of plastid-encoded RNA polymerase *(PAP7/TAC14)... 0.02 OrthoFinder output from all 47 species
GSVIVT01012161001 PTAC14 RNA biosynthesis.organelle machineries.RNA polymerase... 0.07 OrthoFinder output from all 47 species
LOC_Os05g50980.1 PTAC14, LOC_Os05g50980 PAP7/TAC14 cofactor of plastid-encoded RNA polymerase 0.09 OrthoFinder output from all 47 species
Len_g22875 PTAC14 cofactor of plastid-encoded RNA polymerase *(PAP7/TAC14)... 0.01 OrthoFinder output from all 47 species
Msp_g06604 PTAC14 cofactor of plastid-encoded RNA polymerase *(PAP7/TAC14)... 0.03 OrthoFinder output from all 47 species
Nbi_g12531 PTAC14 cofactor of plastid-encoded RNA polymerase *(PAP7/TAC14)... 0.04 OrthoFinder output from all 47 species
Ore_g08718 PTAC14 cofactor of plastid-encoded RNA polymerase *(PAP7/TAC14)... 0.02 OrthoFinder output from all 47 species
Ppi_g30921 PTAC14 cofactor of plastid-encoded RNA polymerase *(PAP7/TAC14)... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0176.g024616 PTAC14 cofactor of plastid-encoded RNA polymerase *(PAP7/TAC14)... 0.02 OrthoFinder output from all 47 species
Smo126991 PTAC14 RNA biosynthesis.organelle machineries.RNA polymerase... 0.04 OrthoFinder output from all 47 species
Solyc02g081920.3.1 PTAC14, Solyc02g081920 PAP7/TAC14 cofactor of plastid-encoded RNA polymerase 0.16 OrthoFinder output from all 47 species
Zm00001e026650_P001 PTAC14, Zm00001e026650 PAP7/TAC14 cofactor of plastid-encoded RNA polymerase 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004817 cysteine-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035596 methylthiotransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050497 alkylthioltransferase activity IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR015353 Rubisco_LSMT_subst-bd 431 488
IPR001214 SET_dom 123 346
No external refs found!