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  5. Mp7g03500.1

Mp7g03500.1 (EMB144, CIN4, COP10, FUS9)


Aliases : EMB144, CIN4, COP10, FUS9

Description : conjugation E2 protein. E2 conjugating component COP10 of COP10-DET1 (CDD) subcomplex


Gene families : OG0000200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp7g03500.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT1G64230 UBC28 ubiquitin-conjugating enzyme 28 0.02 OrthoFinder output from all 47 species
AT4G27960 UBC9 ubiquitin conjugating enzyme 9 0.03 OrthoFinder output from all 47 species
AT5G56150 UBC30 ubiquitin-conjugating enzyme 30 0.04 OrthoFinder output from all 47 species
Adi_g001886 EMB144, CIN4, COP10, FUS9 component *(COP10) of CDDD substrate adaptor module of... 0.02 OrthoFinder output from all 47 species
Adi_g015507 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g017977 UBC30 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g029541 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g041451 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g076665 UBC30 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g098768 UBC28 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06014 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22732 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39862 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Als_g43928 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09895 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0093.g043330 UBC10 E2 MUB ubiquitin-conjugating enzyme & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0096.g043744 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original... 0.03 OrthoFinder output from all 47 species
Cba_g09626 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g09629 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g31392 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g32592 ATUBC8, UBC8 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g73826 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G065800.1 UBC10, Ceric.03G065800 E2 MUB ubiquitin-conjugating enzyme & original... 0.04 OrthoFinder output from all 47 species
Dac_g02991 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g14596 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g46227 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04183 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00153 UBC30 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03167 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014758001 UBC10 Protein degradation.peptide... 0.04 OrthoFinder output from all 47 species
GSVIVT01028729001 UBC10 Protein degradation.peptide... 0.04 OrthoFinder output from all 47 species
Gb_10818 UBC10 conjugation E2 protein 0.02 OrthoFinder output from all 47 species
Gb_20365 UBC9 conjugation E2 protein 0.02 OrthoFinder output from all 47 species
LOC_Os01g46926.1 UBC9, LOC_Os01g46926 conjugation E2 protein 0.03 OrthoFinder output from all 47 species
LOC_Os01g60410.3 ATUBC11, UBC11,... conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Lfl_g05219 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g31695 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37965 UBC30 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
MA_10437205g0010 ATUBC11, UBC11 conjugation E2 protein 0.02 OrthoFinder output from all 47 species
MA_13020g0010 UBC10 conjugation E2 protein 0.02 OrthoFinder output from all 47 species
Nbi_g21380 UBC9 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15849 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12242 UBC9 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20305 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00527 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14975 No alias E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g007510.3.1 UBC10, Solyc06g007510 conjugation E2 protein 0.04 OrthoFinder output from all 47 species
Spa_g24617 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26850 UBC30 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03039 ATUBC11, UBC11 E2 MUB ubiquiTin-conjugaTing enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32271 UBC30 E2 MUB ubiquiTin-conjugaTing enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006609_P001 UBC10, Zm00001e006609 conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Zm00001e020271_P001 UBC9, Zm00001e020271 conjugation E2 protein 0.04 OrthoFinder output from all 47 species
Zm00001e027303_P001 ATUBC11, UBC11,... conjugation E2 protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0033897 ribonuclease T2 activity IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 28 164
No external refs found!