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  5. Mp6g09950.1

Mp6g09950.1 (LRS1)


Aliases : LRS1

Description : Flagellar WD repeat-containing protein Pf20 OS=Chlamydomonas reinhardtii (sp|p93107|pf20_chlre : 91.7)


Gene families : OG0002511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002511_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g09950.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g087408 LRS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58023 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
Cba_g23051 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ceric.06G068400.1 LRS1, Ceric.06G068400 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Dde_g04441 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
GSVIVT01021896001 LRS1 Dynein assembly factor with WDR repeat domains 1... 0.02 OrthoFinder output from all 47 species
Lfl_g10497 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
MA_18695g0010 LRS1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g13261 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pir_g01037 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pir_g09739 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ppi_g01311 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Zm00001e018453_P003 LRS1, Zm00001e018453 Dynein assembly factor with WDR repeat domains 1... 0.04 OrthoFinder output from all 47 species
Zm00001e039445_P001 LRS1, Zm00001e039445 Dynein assembly factor with WDR repeat domains 1... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004484 mRNA guanylyltransferase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0006370 7-methylguanosine mRNA capping IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008192 RNA guanylyltransferase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0044599 AP-5 adaptor complex IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0070568 guanylyltransferase activity IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 76 110
IPR001680 WD40_repeat 214 245
IPR001680 WD40_repeat 292 327
IPR001680 WD40_repeat 117 154
IPR001680 WD40_repeat 250 287
IPR001680 WD40_repeat 34 68
IPR021772 WDR48/Bun107 617 761
No external refs found!