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  5. Mp5g23720.1

Mp5g23720.1 (PGGT-I, ATGGT-IB, GGB)


Aliases : PGGT-I, ATGGT-IB, GGB

Description : subunit beta of type-I protein prenyltransferase complex


Gene families : OG0007125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g23720.1

Target Alias Description ECC score Gene Family Method Actions
Ceric.04G111100.1 PGGT-I,... subunit beta of type-I protein prenyltransferase complex... 0.02 OrthoFinder output from all 47 species
LOC_Os01g05680.1 PGGT-I,... subunit beta of type-I protein prenyltransferase complex 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006442 PGGT-I, ATGGT-IB, GGB not classified & original description: CDS=111-752 0.02 OrthoFinder output from all 47 species
Sam_g17021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR001330 PFTB_repeat 237 277
IPR001330 PFTB_repeat 179 220
IPR001330 PFTB_repeat 138 168
IPR001330 PFTB_repeat 108 123
IPR001330 PFTB_repeat 288 329
No external refs found!