Mp5g21830.1 (HCHIB, B-CHI,...)

Aliases : HCHIB, B-CHI, ATHCHIB, PR-3, PR3, CHI-B

Description : Endochitinase CH25 OS=Brassica napus (sp|q09023|chi2_brana : 197.0)

Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp5g21830.1
Cluster	HCCA: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
AT1G02360	No alias	Chitinase family protein	0.02	OrthoFinder output from all 47 species
Aev_g02874	HCHIB, B-CHI,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g37269	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Dcu_g19889	ATEP3, EP3,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g24430	ATEP3, EP3,...	not classified & original description: none	0.07	OrthoFinder output from all 47 species
GSVIVT01028243001	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica	0.03	OrthoFinder output from all 47 species
GSVIVT01038116001	ATEP3, EP3,...	Endochitinase EP3 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Gb_20766	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
Gb_20767	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
MA_117029g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_80085g0010	HCHIB, B-CHI,...	Basic endochitinase C OS=Secale cereale...	0.03	OrthoFinder output from all 47 species
Ore_g29831	HCHIB, B-CHI,...	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Pir_g47277	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Smo426710	No alias	Endochitinase A OS=Zea mays	0.02	OrthoFinder output from all 47 species
Smo446851	HCHIB, B-CHI,...	Endochitinase A2 OS=Pisum sativum	0.02	OrthoFinder output from all 47 species
Solyc02g082920.4.1	HCHIB, B-CHI,...	Acidic 26 kDa endochitinase OS=Solanum lycopersicum...	0.03	OrthoFinder output from all 47 species
Solyc02g082930.3.1	HCHIB, B-CHI,...	Acidic 27 kDa endochitinase OS=Solanum lycopersicum...	0.02	OrthoFinder output from all 47 species
Solyc07g009530.1.1	HCHIB, B-CHI,...	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004568	chitinase activity	IEA	Interproscan
BP	GO:0006022	aminoglycan metabolic process	None	Extended
BP	GO:0006026	aminoglycan catabolic process	None	Extended
BP	GO:0006030	chitin metabolic process	None	Extended
BP	GO:0006032	chitin catabolic process	IEA	Interproscan
BP	GO:0006040	amino sugar metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0016998	cell wall macromolecule catabolic process	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0046348	amino sugar catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901071	glucosamine-containing compound metabolic process	None	Extended
BP	GO:1901072	glucosamine-containing compound catabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000726	Glyco_hydro_19_cat	108	303

External Links

No external refs found!

Mp5g21830.1 (HCHIB, B-CHI,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation