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  5. Mp5g06150.1

Mp5g06150.1


Description : SLY-type gibberellin signal transducer. component F-box of SCF E3 ubiquitin ligase complex


Gene families : OG0001049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001049_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g06150.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00031290 evm_27.TU.AmTr_v1... F-box protein At2g27310 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT2G27310 No alias F-box family protein 0.03 OrthoFinder output from all 47 species
Adi_g052238 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Aev_g33061 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Aob_g04265 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Aop_g01209 SLY2 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g011128 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0293.g063469 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Cba_g17990 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Cba_g22907 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Dcu_g17842 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.01 OrthoFinder output from all 47 species
Gb_01942 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.02 OrthoFinder output from all 47 species
Gb_11568 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.02 OrthoFinder output from all 47 species
Gb_22367 SLY2 SLY-type gibberellin signal transducer. component F-box... 0.02 OrthoFinder output from all 47 species
LOC_Os11g05660.1 LOC_Os11g05660 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g10650 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Ore_g03590 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Ore_g06355 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.01 OrthoFinder output from all 47 species
Ore_g26122 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Pnu_g17370 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.04 OrthoFinder output from all 47 species
Sam_g09423 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Smo423923 SLY1 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Solyc11g068710.3.1 Solyc11g068710 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e009127_P001 Zm00001e009127 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e014737_P001 Zm00001e014737 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e022823_P002 SLY1, Zm00001e022823 SLY-type gibberellin signal transducer. component F-box... 0.02 OrthoFinder output from all 47 species
Zm00001e040837_P001 Zm00001e040837 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 15 56
No external refs found!