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  5. Mp4g01560.1

Mp4g01560.1


Description : G2-like GARP transcription factor


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g01560.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00042560 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AMTR_s00119p00095480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AT3G13040 No alias myb-like HTH transcriptional regulator family protein 0.04 OrthoFinder output from all 47 species
AT4G04580 No alias Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g078895 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g081643 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g082790 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g095329 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g114670 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g125804 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g08018 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g08301 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20512 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03610 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g04915 KAN, KAN1 KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07061 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08971 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g12175 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g47747 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g01625 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g04391 KAN2 KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07262 KAN2 KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g40224 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29471 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24369.t1 Aspi01Gene24369 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene33723.t1 Aspi01Gene33723 transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35964.t1 Aspi01Gene35964 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene48429.t2 Aspi01Gene48429 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene65261.t1 Aspi01Gene65261 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene69267.t1 PHL1, Aspi01Gene69267 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene70044.t1 Aspi01Gene70044 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007690 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0035.g025591 No alias not classified & original description: CDS=203-1426 0.04 OrthoFinder output from all 47 species
Azfi_s0078.g038309 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0481.g073115 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g11638 No alias transcription factor *(PHR1) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16380 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g20820 PHL1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g36929 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.07G030100.1 Ceric.07G030100 transcription factor *(CLAUSA) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.12G062400.1 Ceric.12G062400 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g08384 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g32685 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g04642 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04748 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g08815 KAN2 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11678 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g17436 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g04920 KAN2 KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31337 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g32284 KAN4, ATS KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007065001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01012707001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01015900001 APL, WDY RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01033515001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Gb_05469 No alias G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Gb_05533 PHR1, AtPHR1 PHR1 transcription factor involved in proline synthesis... 0.03 OrthoFinder output from all 47 species
Gb_06138 No alias G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Gb_09291 No alias Protein PHR1-LIKE 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_17437 KAN, KAN1 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Gb_38388 No alias PHR1 transcription factor involved in proline synthesis... 0.02 OrthoFinder output from all 47 species
LOC_Os02g14490.1 LOC_Os02g14490 Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
LOC_Os06g40710.1 LOC_Os06g40710 G2-like GARP transcription factor 0.05 OrthoFinder output from all 47 species
LOC_Os08g33050.1 KAN, KAN1, LOC_Os08g33050 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os09g12770.1 LOC_Os09g12770 G2-like GARP transcription factor 0.08 OrthoFinder output from all 47 species
LOC_Os09g23200.1 KAN, KAN1, LOC_Os09g23200 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os11g01480.1 LOC_Os11g01480 Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
LOC_Os12g01490.1 LOC_Os12g01490 Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
Len_g28009 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Lfl_g10998 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Lfl_g40548 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g11105 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g22383 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Msp_g24340 PHL1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Msp_g25465 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Nbi_g01255 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g12734 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g15270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17399 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g00386 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g17264 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20359 KAN2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27868 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44869 PHL1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g01267 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g11277 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g11659 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g13544 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g59875 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g26432 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ppi_g39066 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003614 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004589 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005338 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010896 No alias transcription factor *(CLAUSA) & original description: CDS=80-784 0.03 OrthoFinder output from all 47 species
Sam_g09465 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12596 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo405399 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Solyc06g066340.4.1 KAN2, Solyc06g066340 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Solyc08g076010.4.1 Solyc08g076010 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Solyc11g022470.2.1 Solyc11g022470 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Spa_g03187 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g05501 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g05502 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g09479 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Tin_g03896 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Tin_g30427 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001526_P001 Zm00001e001526 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e013626_P001 Zm00001e013626 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e033757_P002 Zm00001e033757 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e035893_P001 Zm00001e035893 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e037731_P001 APL, WDY, Zm00001e037731 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
MF GO:0004594 pantothenate kinase activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
BP GO:0015937 coenzyme A biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
CC GO:0070449 elongin complex IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 141 188
IPR001005 SANT/Myb 48 98
No external refs found!