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  5. Mp3g25100.1

Mp3g25100.1 (GN, EMB30, VAN7)


Aliases : GN, EMB30, VAN7

Description : GBF-type ARF-GTPase guanyl-nucleotide exchange factor


Gene families : OG0002212 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002212_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g25100.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AT1G13980 GN, EMB30, VAN7 sec7 domain-containing protein 0.02 OrthoFinder output from all 47 species
AT5G39500 GNL1, ERMO1 GNOM-like 1 0.05 OrthoFinder output from all 47 species
Adi_g011528 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.01 OrthoFinder output from all 47 species
Adi_g020078 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.06 OrthoFinder output from all 47 species
Aev_g23918 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.03 OrthoFinder output from all 47 species
Ala_g07768 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.06 OrthoFinder output from all 47 species
Ala_g12642 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.05 OrthoFinder output from all 47 species
Als_g21608 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.02 OrthoFinder output from all 47 species
Aob_g06750 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.03 OrthoFinder output from all 47 species
Aop_g09287 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.01 OrthoFinder output from all 47 species
Azfi_s0094.g043397 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.02 OrthoFinder output from all 47 species
Ceric.02G006600.1 GN, EMB30, VAN7,... ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.02 OrthoFinder output from all 47 species
Ceric.15G051500.1 GN, EMB30, VAN7,... ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000241.27 No alias ARF guanine-nucleotide exchange factor GNL2... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000317.26 GN, EMB30, VAN7 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Cre07.g334100 GN, EMB30, VAN7 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Dcu_g39421 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.02 OrthoFinder output from all 47 species
Dde_g00978 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01013109001 GN, EMB30, VAN7 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.11 OrthoFinder output from all 47 species
Gb_01979 GN, EMB30, VAN7 GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.06 OrthoFinder output from all 47 species
Gb_26378 GN, EMB30, VAN7 GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.04 OrthoFinder output from all 47 species
LOC_Os02g22090.1 GN, EMB30, VAN7,... GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.06 OrthoFinder output from all 47 species
LOC_Os03g46330.1 GN, EMB30, VAN7,... GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.04 OrthoFinder output from all 47 species
Len_g08115 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.02 OrthoFinder output from all 47 species
Lfl_g26981 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.06 OrthoFinder output from all 47 species
MA_10434215g0010 GN, EMB30, VAN7 GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.09 OrthoFinder output from all 47 species
MA_50146g0010 GN, EMB30, VAN7 GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.03 OrthoFinder output from all 47 species
Msp_g18773 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.02 OrthoFinder output from all 47 species
Nbi_g04478 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.02 OrthoFinder output from all 47 species
Ore_g06949 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.04 OrthoFinder output from all 47 species
Ore_g15234 GN, EMB30, VAN7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11845 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0267.g026961 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.03 OrthoFinder output from all 47 species
Smo101122 GN, EMB30, VAN7 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
Solyc02g067010.3.1 GN, EMB30, VAN7,... GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.02 OrthoFinder output from all 47 species
Solyc05g013040.3.1 GN, EMB30, VAN7,... GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.09 OrthoFinder output from all 47 species
Tin_g11111 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.01 OrthoFinder output from all 47 species
Zm00001e002340_P001 GN, EMB30, VAN7,... GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.03 OrthoFinder output from all 47 species
Zm00001e037882_P001 GN, EMB30, VAN7,... GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0032012 regulation of ARF protein signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR032691 Mon2/Sec7/BIG1-like_HUS 347 504
IPR000904 Sec7_dom 595 778
No external refs found!