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  5. Mp3g21290.1

Mp3g21290.1


Description : assembly factor CcsB of CCS cytochrome f/c6 maturation system (system II)


Gene families : OG0005948 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005948_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g21290.1
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00156080 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.cytochrome b6/f... 0.06 OrthoFinder output from all 47 species
AT1G49380 No alias cytochrome c biogenesis protein family 0.02 OrthoFinder output from all 47 species
Adi_g012769 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Ala_g05684 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Aob_g16302 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Aop_g07825 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Aspi01Gene04834.t1 Aspi01Gene04834 assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Ceric.13G010200.1 Ceric.13G010200 assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021589.34 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.01 OrthoFinder output from all 47 species
Cre13.g575000 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.04 OrthoFinder output from all 47 species
Dac_g03338 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Ehy_g04866 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
GSVIVT01031911001 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.07 OrthoFinder output from all 47 species
Lfl_g19291 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Nbi_g19038 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Ore_g05642 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Pir_g61712 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.01 OrthoFinder output from all 47 species
Pnu_g11622 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Sam_g52379 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Smo52887 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
Solyc10g051200.2.1 Solyc10g051200 assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Spa_g12033 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Zm00001e005813_P001 Zm00001e005813 assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004565 beta-galactosidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
CC GO:0009341 beta-galactosidase complex IEP HCCA
MF GO:0015925 galactosidase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR007816 ResB-like_domain 446 560
IPR007816 ResB-like_domain 149 412
No external refs found!