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  5. Mp3g16110.1

Mp3g16110.1 (UBP23)


Aliases : UBP23

Description : deubiquitinase (UBP23)


Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g16110.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00096p00170210 UBP15,... Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
Adi_g013898 UBP25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g080212 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08916 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32497 UBP18 deubiquitinase *(UBP15-21) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12934 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49835.t1 UBP18, Aspi01Gene49835 deubiquitinase *(UBP15-21) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.15G035800.1 UBP19, Ceric.15G035800 deubiquitinase *(UBP15-21) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.22G015900.1 UBP25, Ceric.22G015900 not classified & original description: pacid=50613832... 0.02 OrthoFinder output from all 47 species
Cre14.g629300 UBP23 Protein degradation.peptidase families.cysteine-type... 0.06 OrthoFinder output from all 47 species
Dcu_g03145 UBP18 deubiquitinase *(UBP15-21) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g26398 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001911001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01033166001 UBP18 Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01038082001 UBP25 Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
Gb_30872 UBP23 deubiquitinase (UBP23) 0.02 OrthoFinder output from all 47 species
Len_g45877 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429414g0020 UBP18 deubiquitinase (UBP15-21) 0.04 OrthoFinder output from all 47 species
MA_10431488g0010 UBP23 deubiquitinase (UBP23) 0.04 OrthoFinder output from all 47 species
MA_132593g0020 UBP23 Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Nbi_g29923 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09620 UBP18 deubiquitinase *(UBP15-21) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27850 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01994 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50169 No alias deubiquitinase *(UBP15-21) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g069050.3.1 UBP19, Solyc08g069050 deubiquitinase (UBP15-21) 0.03 OrthoFinder output from all 47 species
Spa_g26124 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009435 NAD biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019674 NAD metabolic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 96 399
No external refs found!