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  5. Mp3g01710.1

Mp3g01710.1


Description : no hits & (original description: none)


Gene families : OG0002822 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002822_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g01710.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Adi_g065903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g098041 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene09627.t1 Aspi01Gene09627 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29969.t1 Aspi01Gene29969 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g65935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G048100.1 Ceric.08G048100 not classified & original description: pacid=50638890... 0.04 OrthoFinder output from all 47 species
Ceric.26G053200.1 Ceric.26G053200 not classified & original description: pacid=50599548... 0.07 OrthoFinder output from all 47 species
GSVIVT01021141001 No alias No description available 0.04 OrthoFinder output from all 47 species
Msp_g40361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03338 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019840_P002 Zm00001e019840 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR019380 Casein_kinase_sb_PP28 76 153
No external refs found!