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  5. Mp2g22570.1

Mp2g22570.1


Description : no hits & (original description: none)


Gene families : OG0004452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp2g22570.1

Target Alias Description ECC score Gene Family Method Actions
AT1G80930 No alias MIF4G domain-containing protein / MA3 domain-containing protein 0.05 OrthoFinder output from all 47 species
Adi_g056632 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Adi_g107297 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Aev_g05465 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Ala_g25591 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Als_g57308 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Aop_g08815 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.04 OrthoFinder output from all 47 species
Ceric.1Z119600.1 Ceric.1Z119600 component *(CWC22) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000169.28 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g13960 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Dcu_g04879 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Dde_g06029 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.01 OrthoFinder output from all 47 species
Ehy_g09084 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
GSVIVT01026760001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os12g15420.1 LOC_Os12g15420 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g40215 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Msp_g20824 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.04 OrthoFinder output from all 47 species
Ore_g44880 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Sam_g50425 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.04 OrthoFinder output from all 47 species
Solyc04g079920.4.1 Solyc04g079920 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Tin_g28150 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.04 OrthoFinder output from all 47 species
Zm00001e039666_P001 Zm00001e039666 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003890 MIF4G-like_typ-3 884 1065
IPR003891 Initiation_fac_eIF4g_MI 1175 1281
No external refs found!