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Aliases : UXS5
Description : UDP-D-glucuronic acid decarboxylase
Gene families : OG0000934 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000934_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G28760 | UXS6 | UDP-XYL synthase 6 | 0.02 | OrthoFinder output from all 47 species | |
| AT3G53520 | UXS1, ATUXS1 | UDP-glucuronic acid decarboxylase 1 | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g108934 | AUD1, UXS2, ATUXS2 | EC_4.1 carbon-carbon lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g02095 | AUD1, UXS2, ATUXS2 | EC_4.1 carbon-carbon lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g02174 | UXS5 | EC_4.1 carbon-carbon lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g18766 | UXS5 | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06196 | AUD1, UXS2, ATUXS2 | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g05015 | UXS5 | EC_4.1 carbon-carbon lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g42489 | AUD1, UXS2, ATUXS2 | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g00559 | AUD1, UXS2, ATUXS2 | EC_4.1 carbon-carbon lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0198.g057434 | AUD1, UXS2, ATUXS2 | EC_4.1 carbon-carbon lyase & original description: CDS=1-822 | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.35G050200.1 | AUD1, UXS2,... | EC_4.1 carbon-carbon lyase & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000718.35 | AUD1, UXS2, ATUXS2 | Carbohydrate metabolism.nucleotide sugar... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g09942 | UXS5 | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g07260 | AUD1, UXS2, ATUXS2 | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g03666 | AUD1, UXS2, ATUXS2 | EC_4.1 carbon-carbon lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g04380 | UXS5 | EC_4.1 carbon-carbon lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Gb_01545 | UXS5 | UDP-D-glucuronic acid decarboxylase | 0.02 | OrthoFinder output from all 47 species | |
| Gb_12900 | AUD1, UXS2, ATUXS2 | UDP-D-glucuronic acid decarboxylase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g16980.1 | UXS6, LOC_Os03g16980 | UDP-D-glucuronic acid decarboxylase | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g29990.1 | AUD1, UXS2,... | UDP-D-glucuronic acid decarboxylase | 0.02 | OrthoFinder output from all 47 species | |
| Len_g01759 | AUD1, UXS2, ATUXS2 | EC_4.1 carbon-carbon lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_174294g0010 | UXS5 | UDP-D-glucuronic acid decarboxylase | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g06332 | AUD1, UXS2, ATUXS2 | EC_4.1 carbon-carbon lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g09979 | AUD1, UXS2, ATUXS2 | EC_4.1 carbon-carbon lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g02082 | AUD1, UXS2, ATUXS2 | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g27692 | UXS6 | EC_4.1 carbon-carbon lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g11590 | ATUXS3, UXS3 | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g28216 | AUD1, UXS2, ATUXS2 | EC_4.1 carbon-carbon lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g06255 | ATUXS3, UXS3 | EC_4.1 carbon-carbon lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000237 | AUD1, UXS2, ATUXS2 | EC_4.1 carbon-carbon lyase & original description: CDS=1-1446 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0016.g006940 | UXS6 | EC_4.1 carbon-carbon lyase & original description: CDS=142-1230 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0026.g009542 | AUD1, UXS2, ATUXS2 | EC_4.1 carbon-carbon lyase & original description: CDS=1-1377 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0236.g026549 | AUD1, UXS2, ATUXS2 | EC_4.1 carbon-carbon lyase & original description: CDS=1-1230 | 0.02 | OrthoFinder output from all 47 species | |
| Smo267191 | AUD1, UXS2, ATUXS2 | Carbohydrate metabolism.nucleotide sugar... | 0.03 | OrthoFinder output from all 47 species | |
| Smo267587 | AUD1, UXS2, ATUXS2 | Carbohydrate metabolism.nucleotide sugar... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g22502 | AUD1, UXS2, ATUXS2 | EC_4.1 carbon-carbon lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g49773 | UXS6 | EC_4.1 carbon-carbon lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g05896 | UXS6 | EC_4.1 carbon-carbon lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e001241_P001 | UXS5, Zm00001e001241 | UDP-D-glucuronic acid decarboxylase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019359_P001 | AUD1, UXS2,... | UDP-D-glucuronic acid decarboxylase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e038475_P001 | UXS6, Zm00001e038475 | UDP-D-glucuronic acid decarboxylase | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| MF | GO:0015299 | obsolete solute:proton antiporter activity | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
| CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | HCCA |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
| CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | HCCA |
| CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR016040 | NAD(P)-bd_dom | 36 | 330 |
| No external refs found! |