Mp2g09230.1 (TAF4, TAF4B)

Aliases : TAF4, TAF4B

Description : component TAF4 of TFIId basal transcription regulation complex

Gene families : OG0002362 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002362_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp2g09230.1

Target	Alias	Description	ECC score	Gene Family Method
Adi_g064149	TAF4, TAF4B	component *(TAF4) of TFIId basal transcription...	0.02	OrthoFinder output from all 47 species
Aev_g38215	TAF4, TAF4B	component *(TAF4) of TFIId basal transcription...	0.05	OrthoFinder output from all 47 species
Ala_g06852	TAF4, TAF4B	component *(TAF4) of TFIId basal transcription...	0.02	OrthoFinder output from all 47 species
Als_g10535	TAF4, TAF4B	component *(TAF4) of TFIId basal transcription...	0.07	OrthoFinder output from all 47 species
Aob_g22118	TAF4, TAF4B	component *(TAF4) of TFIId basal transcription...	0.01	OrthoFinder output from all 47 species
Aob_g42043	TAF4, TAF4B	component *(TAF4) of TFIId basal transcription...	0.06	OrthoFinder output from all 47 species
Aop_g08190	TAF4, TAF4B	component *(TAF4) of TFIId basal transcription...	0.02	OrthoFinder output from all 47 species
Cba_g20855	TAF4, TAF4B	component *(TAF4) of TFIId basal transcription...	0.03	OrthoFinder output from all 47 species
Ceric.35G034700.1	TAF4, TAF4B,...	component *(TAF4) of TFIId basal transcription...	0.05	OrthoFinder output from all 47 species
Dde_g15387	TAF4, TAF4B	component *(TAF4) of TFIId basal transcription...	0.01	OrthoFinder output from all 47 species
GSVIVT01009365001	TAF4, TAF4B	RNA biosynthesis.RNA polymerase II-dependent...	0.15	OrthoFinder output from all 47 species
Gb_41115	TAF4, TAF4B	component TAF4 of TFIId basal transcription regulation complex	0.02	OrthoFinder output from all 47 species
LOC_Os02g43750.1	TAF4, TAF4B,...	component TAF4 of TFIId basal transcription regulation complex	0.06	OrthoFinder output from all 47 species
Len_g35033	TAF4, TAF4B	component *(TAF4) of TFIId basal transcription...	0.02	OrthoFinder output from all 47 species
MA_168127g0010	TAF4, TAF4B	component TAF4 of TFIId basal transcription regulation complex	0.06	OrthoFinder output from all 47 species
Ppi_g40466	TAF4, TAF4B	component *(TAF4) of TFIId basal transcription...	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000689	TAF4, TAF4B	component *(TAF4) of TFIId basal transcription...	0.02	OrthoFinder output from all 47 species
Sam_g24743	No alias	component *(TAF4) of TFIId basal transcription...	0.01	OrthoFinder output from all 47 species
Solyc04g078050.3.1	TAF4, TAF4B,...	component TAF4 of TFIId basal transcription regulation complex	0.06	OrthoFinder output from all 47 species
Spa_g50299	TAF4, TAF4B	component *(TAF4) of TFIId basal transcription...	0.02	OrthoFinder output from all 47 species
Zm00001e002074_P001	TAF4, TAF4B,...	component TAF4 of TFIId basal transcription regulation complex	0.02	OrthoFinder output from all 47 species
Zm00001e016810_P001	TAF4, TAF4B,...	component TAF4 of TFIId basal transcription regulation complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005667	transcription regulator complex	None	Extended
CC	GO:0005669	transcription factor TFIID complex	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006352	DNA-templated transcription initiation	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0090575	RNA polymerase II transcription regulator complex	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003712	transcription coregulator activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006479	protein methylation	IEP	HCCA
MF	GO:0008170	N-methyltransferase activity	IEP	HCCA
BP	GO:0008213	protein alkylation	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0008276	protein methyltransferase activity	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
MF	GO:0016278	lysine N-methyltransferase activity	IEP	HCCA
MF	GO:0016279	protein-lysine N-methyltransferase activity	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
BP	GO:0016571	histone methylation	IEP	HCCA
CC	GO:0016592	mediator complex	IEP	HCCA
BP	GO:0018022	peptidyl-lysine methylation	IEP	HCCA
MF	GO:0018024	histone lysine N-methyltransferase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018205	peptidyl-lysine modification	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0034968	histone lysine methylation	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
MF	GO:0042054	histone methyltransferase activity	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022003	RST	140	199
IPR007900	TAF4_C	867	1186

External Links

No external refs found!

Mp2g09230.1 (TAF4, TAF4B)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation