- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Protein Iojap, chloroplastic OS=Arabidopsis thaliana (sp|q9ldy9|iojac_arath : 169.0)
Gene families : OG0006946 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006946_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp2g04320.1 | |
| Cluster | HCCA: Cluster_66 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G12930 | No alias | Lojap-related protein | 0.09 | OrthoFinder output from all 47 species | |
| Adi_g042550 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g08821 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g09443 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g08779 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.20G007700.1 | Ceric.20G007700 | not classified & original description: pacid=50567004... | 0.02 | OrthoFinder output from all 47 species | |
| Cre03.g205600 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g00869 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01020411001 | No alias | Protein Iojap, chloroplastic OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_07722 | No alias | Protein Iojap, chloroplastic OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g09714 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g13808 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g18231 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0010.g004683 | No alias | not classified & original description: CDS=335-1009 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g17932 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo402255 | No alias | Protein Iojap, chloroplastic OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g066460.3.1 | Solyc07g066460 | Protein Iojap, chloroplastic OS=Arabidopsis thaliana... | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g53876 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0015098 | molybdate ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015689 | molybdate ion transport | IEP | HCCA |
| BP | GO:0015698 | inorganic anion transport | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0016987 | sigma factor activity | IEP | HCCA |
| MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| MF | GO:0030976 | thiamine pyrophosphate binding | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| MF | GO:0050997 | quaternary ammonium group binding | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0106413 | dihydrouridine synthase activity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901681 | sulfur compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |