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  5. Mp2g03260.1

Mp2g03260.1 (MEE12)


Aliases : MEE12

Description : transcription initiation factor (CCG/MEE12)


Gene families : OG0005779 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005779_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp2g03260.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00236980 MEE12,... RNA biosynthesis.RNA polymerase I-dependent... 0.03 OrthoFinder output from all 47 species
AT2G02955 MEE12 maternal effect embryo arrest 12 0.03 OrthoFinder output from all 47 species
Adi_g010530 MEE12 transcription initiation factor *(CCG/MEE12) & original... 0.02 OrthoFinder output from all 47 species
Ala_g10093 No alias transcription initiation factor *(CCG/MEE12) & original... 0.04 OrthoFinder output from all 47 species
Als_g21696 MEE12 transcription initiation factor *(CCG/MEE12) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene64839.t2 MEE12, Aspi01Gene64839 transcription initiation factor *(CCG/MEE12) & original... 0.02 OrthoFinder output from all 47 species
Dac_g21613 MEE12 transcription initiation factor *(CCG/MEE12) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0131.g022081 MEE12 transcription initiation factor *(CCG/MEE12) & original... 0.02 OrthoFinder output from all 47 species
Smo115616 No alias RNA biosynthesis.RNA polymerase I-dependent... 0.02 OrthoFinder output from all 47 species
Spa_g07589 MEE12 transcription initiation factor *(CCG/MEE12) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e031353_P001 MEE12, Zm00001e031353 transcription initiation factor (CCG/MEE12) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!