Mp1g27530.1


Description : no hits & (original description: none)


Gene families : OG0000255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g27530.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00023650 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00013p00055400 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT2G05230 No alias DNAJ heat shock N-terminal domain-containing protein 0.02 OrthoFinder output from all 47 species
AT2G05250 No alias DNAJ heat shock N-terminal domain-containing protein 0.02 OrthoFinder output from all 47 species
AT3G06340 No alias DNAJ heat shock N-terminal domain-containing protein 0.02 OrthoFinder output from all 47 species
AT5G18750 No alias DNAJ heat shock N-terminal domain-containing protein 0.02 OrthoFinder output from all 47 species
Adi_g015298 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g058078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g079764 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g102972 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10067 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15964 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15965 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40019 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33331.t1 Aspi01Gene33331 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010670 No alias not classified & original description: CDS=1-2310 0.02 OrthoFinder output from all 47 species
Azfi_s0027.g023718 No alias not classified & original description: CDS=66-2393 0.03 OrthoFinder output from all 47 species
Cba_g04006 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G052600.1 Ceric.08G052600 not classified & original description: pacid=50638471... 0.03 OrthoFinder output from all 47 species
Ceric.13G032100.1 Ceric.13G032100 not classified & original description: pacid=50635670... 0.04 OrthoFinder output from all 47 species
Ceric.1Z097000.1 Ceric.1Z097000 not classified & original description: pacid=50640979... 0.02 OrthoFinder output from all 47 species
Dac_g23485 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04874 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g36406 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017824001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01028708001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01030061001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_17193 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g27740.3 LOC_Os01g27740 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g28310.1 LOC_Os03g28310 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g31940.1 LOC_Os04g31940 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g34440.1 LOC_Os06g34440 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g36530.1 LOC_Os11g36530 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g01381 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g13912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g51313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_96489g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g15554 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g08915 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12576 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14840 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g19617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11856 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g11857 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g37703 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50190 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g098250.4.1 Solyc01g098250 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc05g040050.3.1 Solyc05g040050 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc08g005300.3.1 Solyc08g005300 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc08g029220.3.1 Solyc08g029220 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g26885 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g07672 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e017660_P001 Zm00001e017660 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e025632_P001 Zm00001e025632 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e025633_P001 Zm00001e025633 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e040755_P001 Zm00001e040755 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e041002_P001 Zm00001e041002 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e041003_P001 Zm00001e041003 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0031491 nucleosome binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0080009 mRNA methylation IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 67 128
IPR024593 DUF3444 681 893
No external refs found!